RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 MYRFLQ96LU7 910 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 LSM14BQ9BX40 385 aaKnown RBP17.76■□□□□ 0.43
PRKCB-210ENST00000498739 KCNK12Q9HB15 430 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 CBX8Q9HC52 389 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 CSNK1G1Q9HCP0 422 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 EHD2Q9NZN4 543 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 C5orf42Q9H799 3197 aa17.76■□□□□ 0.43
PRKCB-210ENST00000498739 RNF225M0QZC1 329 aaPredicted RBP17.75■□□□□ 0.43
PRKCB-210ENST00000498739 PAEPP09466 180 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 VDRP11473 427 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 NPR3P17342 541 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 SLC5A3P53794 718 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 PTPN21Q16825 1174 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 GOLGA7BQ2TAP0 167 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 GPR158Q5T848 1215 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 PARM1Q6UWI2 310 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 MTSS1LQ765P7 747 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 TMEM150AQ86TG1 271 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 NUP93Q8N1F7 819 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 RSAD2Q8WXG1 361 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 ZSWIM3Q96MP5 696 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 GPR88Q9GZN0 384 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 IGSF9Q9P2J2 1179 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 DNAJC12Q9UKB3 198 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 TSPAN16Q9UKR8 245 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 NUMBLQ9Y6R0 609 aa17.75■□□□□ 0.43
PRKCB-210ENST00000498739 ANHXE9PGG2 379 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 TADA3O75528 432 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 RTN3O95197 1032 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-210ENST00000498739 USP8P40818 1118 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 TPM4P67936 248 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 HTR4Q13639 388 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 LUZP1Q86V48 1076 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 ZSCAN18Q8TBC5 510 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-210ENST00000498739 MRPS31Q92665 395 aaKnown RBP17.74■□□□□ 0.43
PRKCB-210ENST00000498739 FGF14Q92915 247 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 TTLL2Q9BWV7 592 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 DUSP16Q9BY84 665 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 HESX1Q9UBX0 185 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 AJAP1Q9UKB5 411 aaPredicted RBP17.74■□□□□ 0.43
PRKCB-210ENST00000498739 KIAA1257Q9ULG3 409 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 SORCS3Q9UPU3 1222 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 DOCK6Q96HP0 2047 aa17.74■□□□□ 0.43
PRKCB-210ENST00000498739 LGALS16A8MUM7 142 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 TNFRSF10BO14763 440 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 DCXO43602 365 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 CAVIN2O95810 425 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 CALCAP01258 141 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 BRD2P25440 801 aaKnown RBP17.73■□□□□ 0.43
PRKCB-210ENST00000498739 YWHAQP27348 245 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 ZNF132P52740 706 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 UBXN1Q04323 297 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 FAM78AQ5JUQ0 283 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 TTC30AQ86WT1 665 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 TFAP2BQ92481 460 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 NXPE3Q969Y0 559 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 PCMTD1Q96MG8 357 aaPredicted RBP17.73■□□□□ 0.43
PRKCB-210ENST00000498739 ASB16Q96NS5 453 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 SLITRK1Q96PX8 696 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 KXD1Q9BQD3 176 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 TASP1Q9H6P5 420 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 TRPC7Q9HCX4 862 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 CNTN6Q9UQ52 1028 aa17.73■□□□□ 0.43
PRKCB-210ENST00000498739 LRRC10BA6NIK2 292 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 GOLGA6L19H0YKK7 550 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 O00370 1275 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 KLK7P49862 253 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 BCAT1P54687 386 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 SLC8A3P57103 927 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 TAF10Q12962 218 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 TDGQ13569 410 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 RAPGEF1Q13905 1077 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 KLHDC7AQ5VTJ3 777 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 TXNDC8Q6A555 127 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 DPY19L2P1Q6NXN4 242 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 APTXQ7Z2E3 356 aaKnown RBP17.72■□□□□ 0.43
PRKCB-210ENST00000498739 GPRIN1Q7Z2K8 1008 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 MAB21L3Q8N8X9 362 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 ANKRD52Q8NB46 1076 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 SCAMP5Q8TAC9 235 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 SHC3Q92529 594 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 SMARCD2Q92925 531 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 FBXO32Q969P5 355 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 RPP25Q9BUL9 199 aaKnown RBP17.72■□□□□ 0.43
PRKCB-210ENST00000498739 PNPLA8Q9NP80 782 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 TRPM5Q9NZQ8 1165 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 FHOD1Q9Y613 1164 aa17.72■□□□□ 0.43
PRKCB-210ENST00000498739 HHLA1C9JL84 531 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 ALADP13716 330 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 UCHL3P15374 230 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 FCARP24071 287 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 DDX6P26196 483 aaKnown RBP eCLIP17.71■□□□□ 0.43
PRKCB-210ENST00000498739 BST2Q10589 180 aaKnown RBP17.71■□□□□ 0.43
PRKCB-210ENST00000498739 SYCP1Q15431 976 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 STILQ15468 1287 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 TANGO2Q6ICL3 276 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 GPIHBP1Q8IV16 184 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 SLC44A3Q8N4M1 653 aa17.71■□□□□ 0.43
PRKCB-210ENST00000498739 UBA3Q8TBC4 463 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms