RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 KIF4AO95239 1232 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 WEE2P0C1S8 567 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 MYBL1P10243 752 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 P4HA1P13674 534 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 IBSPP21815 317 aaPredicted RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 POLR2BP30876 1174 aaKnown RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 TEX35Q5T0J7 233 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 RARS2Q5T160 578 aaKnown RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 NT5DC3Q86UY8 548 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 HPDLQ96IR7 371 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 ZNF558Q96NG5 402 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 MMS19Q96T76 1030 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 TRIM6Q9C030 488 aaPredicted RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 AVENQ9NQS1 362 aaPredicted RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 SPG21Q9NZD8 308 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 CNTN3Q9P232 1028 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 CTTNBP2NLQ9P2B4 639 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 UVRAGQ9P2Y5 699 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 NXF1Q9UBU9 619 aaKnown RBP20.94■□□□□ 0.94
ACTN4-208ENST00000497637 AMFRQ9UKV5 643 aa20.94■□□□□ 0.94
ACTN4-208ENST00000497637 C2orf71A6NGG8 1288 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 PDE2AO00408 941 aaPredicted RBP20.93■□□□□ 0.94
ACTN4-208ENST00000497637 HOXA2O43364 376 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 THAP12O43422 761 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 CLASP2O75122 1294 aaKnown RBP20.93■□□□□ 0.94
ACTN4-208ENST00000497637 RECQL4O94761 1208 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 CENPCQ03188 943 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 C11orf63Q6NUN7 778 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 KCNT2Q6UVM3 1135 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 PEX26Q7Z412 305 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 MCOLN2Q8IZK6 566 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 BEST2Q8NFU1 509 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 ZNF606Q8WXB4 792 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 ZNF653Q96CK0 615 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 PBKQ96KB5 322 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 CAPZA3Q96KX2 299 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 ADAM2Q99965 735 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 PDCL3Q9H2J4 239 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 ELAC1Q9H777 363 aaKnown RBP20.93■□□□□ 0.94
ACTN4-208ENST00000497637 TMEM161AQ9NX61 479 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 IGSF9Q9P2J2 1179 aa20.93■□□□□ 0.94
ACTN4-208ENST00000497637 PRR5-ARHGAP8B1AHC4 643 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 C9IYK1 514 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 PAEPP09466 180 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 KCNE1P15382 129 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 CD58P19256 250 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 GUCY2FP51841 1108 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 ARHGAP8P85298 464 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 WDR72Q3MJ13 1102 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 NAA35Q5VZE5 725 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 DAAM2Q86T65 1068 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 PHF13Q86YI8 300 aaPredicted RBP20.92■□□□□ 0.94
ACTN4-208ENST00000497637 DCLK2Q8N568 766 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 TTC39CQ8N584 583 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 CYFIP2Q96F07 1278 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 VCPIP1Q96JH7 1222 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 ZMAT2Q96NC0 199 aaKnown RBP20.92■□□□□ 0.94
ACTN4-208ENST00000497637 SDCBP2Q9H190 292 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 NXF3Q9H4D5 531 aaKnown RBP20.92■□□□□ 0.94
ACTN4-208ENST00000497637 KCNK12Q9HB15 430 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 CHST12Q9NRB3 414 aa20.92■□□□□ 0.94
ACTN4-208ENST00000497637 LSM8O95777 96 aaKnown RBP20.91■□□□□ 0.94
ACTN4-208ENST00000497637 SP9P0CG40 484 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 MYH10P35580 1976 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 PAFAH1B1P43034 410 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 NOMO3P69849 1222 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 SCARA5Q6ZMJ2 495 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 TMEM130Q8N3G9 435 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 HES6Q96HZ4 224 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 CNOT8Q9UFF9 292 aaKnown RBP20.91■□□□□ 0.94
ACTN4-208ENST00000497637 UBQLN1Q9UMX0 589 aaKnown RBP20.91■□□□□ 0.94
ACTN4-208ENST00000497637 PCDHGC3Q9UN70 934 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 HES2Q9Y543 173 aa20.91■□□□□ 0.94
ACTN4-208ENST00000497637 USP24Q9UPU5 2620 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 GPR182O15218 404 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 RPS6KA5O75582 802 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 NSFP46459 744 aaKnown RBP20.9■□□□□ 0.94
ACTN4-208ENST00000497637 ATXN1P54253 815 aaKnown RBP20.9■□□□□ 0.94
ACTN4-208ENST00000497637 FAM189BP81408 668 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 MYO1EQ12965 1108 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 LIN9Q5TKA1 542 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 CCDC149Q6ZUS6 474 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 LRRC52Q8N7C0 313 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 SMG8Q8ND04 991 aaKnown RBP20.9■□□□□ 0.94
ACTN4-208ENST00000497637 WHAMMQ8TF30 809 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 CPA5Q8WXQ8 436 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 RIN2Q8WYP3 895 aaPredicted RBP20.9■□□□□ 0.94
ACTN4-208ENST00000497637 RPS6KC1Q96S38 1066 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 ZSWIM1Q9BR11 485 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 NUP85Q9BW27 656 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 ZNF518BQ9C0D4 1074 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 CXCL16Q9H2A7 254 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 SMYD3Q9H7B4 428 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 HCSTQ9UBK5 93 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 ST3GAL5Q9UNP4 418 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 IPPQ9Y573 584 aa20.9■□□□□ 0.94
ACTN4-208ENST00000497637 XPOTO43592 962 aaKnown RBP20.89■□□□□ 0.93
ACTN4-208ENST00000497637 MGEA5O60502 916 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CILPO75339 1184 aa20.89■□□□□ 0.93
ACTN4-208ENST00000497637 CFHP08603 1231 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms