RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 ADAM22Q9P0K1 906 aa12.78□□□□□ -0.36
BRD3-206ENST00000494743 TJP2Q9UDY2 1190 aa12.78□□□□□ -0.36
BRD3-206ENST00000494743 CDY1Q9Y6F8 540 aa12.78□□□□□ -0.36
BRD3-206ENST00000494743 VWA8A3KMH1 1905 aa12.78□□□□□ -0.36
BRD3-206ENST00000494743 MTMR11A4FU01 709 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 E5RJQ4 531 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
BRD3-206ENST00000494743 KRT86O43790 486 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 AP1G2O75843 785 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 GABBR2O75899 941 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 VNN2O95498 520 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ERBB2P04626 1255 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 CALB1P05937 261 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 RB1P06400 928 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 RRM1P23921 792 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 PBX2P40425 430 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ERVK-21P61565 698 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 SMAD3P84022 425 aaKnown RBP12.77□□□□□ -0.37
BRD3-206ENST00000494743 TAP1Q03518 808 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 SMARCB1Q12824 385 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 PTPN14Q15678 1187 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ARHGAP29Q52LW3 1261 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 C2CD6Q53TS8 623 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 KIAA1841Q6NSI8 718 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 NYAP1Q6ZVC0 841 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 TMEM110Q86TL2 294 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ERICH1Q86X53 443 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 SPATA2LQ8IUW3 424 aaPredicted RBP12.77□□□□□ -0.37
BRD3-206ENST00000494743 RFFLQ8WZ73 363 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ZNF653Q96CK0 615 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 HSFY1Q96LI6 401 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 SAMD11Q96NU1 681 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 NOX5Q96PH1 765 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 MED10Q9BTT4 135 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 C1QTNF1Q9BXJ1 281 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 UBXN6Q9BZV1 441 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 RXFP1Q9HBX9 757 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 ABCB6Q9NP58 842 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 PNPLA8Q9NP80 782 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 FNIP2Q9P278 1114 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 HCN4Q9Y3Q4 1203 aa12.77□□□□□ -0.37
BRD3-206ENST00000494743 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 HHLA1C9JL84 531 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 C2CD2LO14523 706 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 MTA2O94776 668 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 CPB1P15086 417 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 RPL17P18621 184 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 BDNFP23560 247 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 MAGEA11P43364 429 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 RGS7P49802 495 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 CDR1P51861 262 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 HADHBP55084 474 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 MAP3K7CLP57077 242 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 SLC8A3P57103 927 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 ROR1Q01973 937 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 UBE3AQ05086 875 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 PPP1R15BQ5SWA1 713 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 PIGZQ86VD9 579 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 XYLT1Q86Y38 959 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 RNF10Q8N5U6 811 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 MSANTD4Q8NCY6 345 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 SPPL2BQ8TCT7 592 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 C2orf15Q8WU43 125 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 KCTD13Q8WZ19 329 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 KCNK16Q96T55 309 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 UHRF1Q96T88 793 aaPredicted RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 C11orf84Q9BUA3 381 aaPredicted RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 CRISPLD1Q9H336 500 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 DMAP1Q9NPF5 467 aaPredicted RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
BRD3-206ENST00000494743 MRPL17Q9NRX2 175 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 CNOT8Q9UFF9 292 aaKnown RBP12.76□□□□□ -0.37
BRD3-206ENST00000494743 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 COG5Q9UP83 839 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 PCDHB5Q9Y5E4 795 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 IRAK3Q9Y616 596 aa12.76□□□□□ -0.37
BRD3-206ENST00000494743 PAPSS1O43252 624 aaPredicted RBP12.75□□□□□ -0.37
BRD3-206ENST00000494743 ABLIM3O94929 683 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 CYP2F1P24903 491 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 DNAJB1P25685 340 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 DNAJB2P25686 324 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 OR1D2P34982 312 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 ARPP19P56211 112 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 CREMQ03060 361 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 MAMLD1Q13495 774 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 RAB33AQ14088 237 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 RAB30Q15771 203 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 RAB41Q5JT25 222 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 CYP4A22Q5TCH4 519 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 LIN9Q5TKA1 542 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 VSTM1Q6UX27 236 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 GPRIN1Q7Z2K8 1008 aa12.75□□□□□ -0.37
BRD3-206ENST00000494743 RHOT2Q8IXI1 618 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms