RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 C1orf220Q5T0J3 134 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 C1orf228Q6PIY5 440 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 C4orf50Q6ZRC1 276 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 SPATA17Q96L03 361 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 TTLL2Q9BWV7 592 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 FAM126AQ9BYI3 521 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 GOLPH3LQ9H4A5 285 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 DMAC2Q9NW81 257 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 MAGEC2Q9UBF1 373 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 UXTQ9UBK9 157 aaPredicted RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 NXF1Q9UBU9 619 aaKnown RBP12.43□□□□□ -0.42
VTI1A-208ENST00000494728 HMGXB4Q9UGU5 601 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 NUP205Q92621 2012 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 WDFY3Q8IZQ1 3526 aa12.43□□□□□ -0.42
VTI1A-208ENST00000494728 ASPMQ8IZT6 3477 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 TRAV19A0A0A6YYK7 116 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 STAU1O95793 577 aaKnown RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 GJA4P35212 333 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 GRIK1P39086 918 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 PXNP49023 591 aaPredicted RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 NDUFA8P51970 172 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 SNRPFP62306 86 aaKnown RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 CLDN10P78369 228 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 ORC1Q13415 861 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 GAB4Q2WGN9 574 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 EML3Q32P44 896 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 DGKKQ5KSL6 1271 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 VSTM1Q6UX27 236 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 CEP57L1Q8IYX8 460 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 ABCA7Q8IZY2 2146 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 OR6B3Q8NGW1 331 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 PARD3BQ8TEW8 1205 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 B3GNT5Q9BYG0 378 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 EXOC1Q9NV70 894 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 THG1LQ9NWX6 298 aaKnown RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 CFAP45Q9UL16 551 aa12.42□□□□□ -0.42
VTI1A-208ENST00000494728 R3HCC1Q9Y3T6 440 aaKnown RBP12.42□□□□□ -0.42
VTI1A-208ENST00000494728 TNRC6BQ9UPQ9 1833 aaKnown RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 FAM237AA0A1B0GTK4 181 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 SOBPA7XYQ1 873 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 TRDMT1O14717 391 aaKnown RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 RNF40O75150 1001 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 C4BPAP04003 597 aaKnown RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 USP17L7P0C7H9 530 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 PTPN1P18031 435 aaKnown RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 CMA1P23946 247 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 GNL1P36915 607 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 TNNC1P63316 161 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 MESP2Q0VG99 397 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 BIRC3Q13489 604 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 ZNF699Q32M78 642 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 SPOPLQ6IQ16 392 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 PRR23BQ6ZRT6 265 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 B3GALNT2Q8NCR0 500 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 OSCP1Q8WVF1 389 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 C8orf48Q96LL4 319 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 RNF38Q9H0F5 515 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 LINC00597Q9H2U6 94 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 SNX25Q9H3E2 840 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 ECT2Q9H8V3 914 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 VRTNQ9H8Y1 702 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 DLL3Q9NYJ7 618 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 ARHGAP26Q9UNA1 814 aa12.41□□□□□ -0.42
VTI1A-208ENST00000494728 KMT2BQ9UMN6 2715 aaPredicted RBP12.41□□□□□ -0.42
VTI1A-208ENST00000494728 USP24Q9UPU5 2620 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 ZNF840PA6NDX5 716 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 A8MXQ7 604 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 OLFM2O95897 454 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 NR3C1P04150 777 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 PGFP49763 221 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 GALK1P51570 392 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 IFRD2Q12894 506 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 TRPC3Q13507 836 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 NCOA4Q13772 614 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 KCNB1Q14721 858 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 PDGFRLQ15198 375 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 MAPRE1Q15691 268 aaKnown RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 RSPO4Q2I0M5 234 aaPredicted RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 FAM35AQ86V20 835 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 SLC9A9Q8IVB4 645 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 SFTPA1Q8IWL2 248 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 SPATA32Q96LK8 384 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 KCNK16Q96T55 309 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 GDPD2Q9HCC8 539 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 DUS2Q9NX74 493 aaKnown RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 SMPD4Q9NXE4 827 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 CGNQ9P2M7 1197 aaKnown RBP12.4□□□□□ -0.42
VTI1A-208ENST00000494728 PLXND1Q9Y4D7 1925 aa12.4□□□□□ -0.42
VTI1A-208ENST00000494728 SPEGQ15772 3267 aa12.4□□□□□ -0.43
VTI1A-208ENST00000494728 THADAQ6YHU6 1953 aa12.39□□□□□ -0.43
VTI1A-208ENST00000494728 LEFTY2O00292 366 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms