RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 EDNRBP24530 442 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 CNTFP26441 200 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 PSMC4P43686 418 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 GABRB2P47870 512 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 ACOT2P49753 483 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 VPS41P49754 854 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 ALDH5A1P51649 535 aaPredicted RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 STAT5BP51692 787 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 PDIA2Q13087 525 aaKnown RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 PDK2Q15119 407 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 TRIP13Q15645 432 aaPredicted RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 ZNF667Q5HYK9 610 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 TSHZ1Q6ZSZ6 1077 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 PALM2Q8IXS6 379 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 FITM2Q8N6M3 262 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 GDAP1Q8TB36 358 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 ASAP3Q8TDY4 903 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 N4BP2L2Q92802 583 aaPredicted RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 TCHPQ9BT92 498 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 TARS2Q9BW92 718 aaKnown RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 ASB7Q9H672 318 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 SYNCQ9H7C4 482 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 ETNK1Q9HBU6 452 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 LRRC4CQ9HCJ2 640 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 PNPLA8Q9NP80 782 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 PAK5Q9P286 719 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 CHORDC1Q9UHD1 332 aaPredicted RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 ZNF180Q9UJW8 692 aa12.03□□□□□ -0.48
RFC4-214ENST00000494047 CPSF3Q9UKF6 684 aaKnown RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 MTO1Q9Y2Z2 717 aaKnown RBP12.03□□□□□ -0.48
RFC4-214ENST00000494047 MGAMO43451 1857 aa12.02□□□□□ -0.48
RFC4-214ENST00000494047 ACKR2O00590 384 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 TRDMT1O14717 391 aaKnown RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 CCDC22O60826 627 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 DNAJC6O75061 913 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 PRKCBP05771 671 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 ZFXP17010 805 aaPredicted RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 TGM2P21980 687 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 PTPN4P29074 926 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 MYO1EQ12965 1108 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 CAPSQ13938 189 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 SPRED3Q2MJR0 410 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 TSNAXIP1Q2TAA8 658 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 NBPF20Q3BBV1 942 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 RIOX2Q8IUF8 465 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 PASD1Q8IV76 773 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 NAT8LQ8N9F0 302 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 ARMC5Q96C12 935 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 ACO2Q99798 780 aaKnown RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 FERMT1Q9BQL6 677 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 MAK16Q9BXY0 300 aaKnown RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 BCO2Q9BYV7 579 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 IQCGQ9H095 443 aaKnown RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 PRMT7Q9NVM4 692 aaPredicted RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 SRRDQ9UH36 339 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 TBK1Q9UHD2 729 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 ZMYND8Q9ULU4 1186 aaPredicted RBP12.02□□□□□ -0.49
RFC4-214ENST00000494047 IVNS1ABPQ9Y6Y0 642 aa12.02□□□□□ -0.49
RFC4-214ENST00000494047 KIAA0100Q14667 2235 aaKnown RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 IGKV6-21A0A0C4DH24 114 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 POC1B-GALNT4F8VUJ3 575 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 MSCO60682 206 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 LGR5O75473 907 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 KRT37O76014 449 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 FARP2O94887 1054 aaPredicted RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 SLC25A27O95847 323 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 INHBAP08476 426 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 PROZP22891 400 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 GJC1P36383 396 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 SERPINB9P50453 376 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 ROR1Q01973 937 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 SLC25A11Q02978 314 aaKnown RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 DNAJC3Q13217 504 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 TMEM132BQ14DG7 1078 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 ZKSCAN8Q15776 578 aaPredicted RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 KAZNQ674X7 775 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 ATG16L1Q676U5 607 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 CCDC62Q6P9F0 684 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 LBX2Q6XYB7 198 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 TEKT4Q8WW24 435 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 APOPT1Q96IL0 206 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 PAFAH2Q99487 392 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 SH2D3AQ9BRG2 576 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 KLC2Q9H0B6 622 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 STN1Q9H668 368 aaKnown RBP12.01□□□□□ -0.49
RFC4-214ENST00000494047 TLE6Q9H808 572 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 MORF4L1Q9UBU8 362 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 SORCS3Q9UPU3 1222 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 TNFSF13BQ9Y275 285 aa12.01□□□□□ -0.49
RFC4-214ENST00000494047 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms