RNA–Protein interactions for RNA: ENST00000493339.1

PTK7-218, Transcript of protein tyrosine kinase 7 (inactive), human

TSL 2

Gene PTK7, Length 2,987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK7-218	ENST00000493339	AVEN	Q9NQS1	362 aa	Predicted RBP	13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	INPP5F	Q9Y2H2	1132 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	ROBO1	Q9Y6N7	1651 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	MYPN	Q86TC9	1320 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	BOLA2-SMG1P6	H3BVE0	249 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	PROC	P04070	461 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	CPOX	P36551	454 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	GDF10	P55107	478 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	NCKAP1L	P55160	1127 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	IRX4	P78413	519 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	PEX6	Q13608	980 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	GK3P	Q14409	553 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	SNRNP35	Q16560	246 aa	Known RBP	13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	FAM91A1	Q658Y4	838 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	SLFN13	Q68D06	897 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	LRRC8B	Q6P9F7	803 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	KYAT3	Q6YP21	454 aa	Known RBP	13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	SEPT12	Q8IYM1	358 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	E2F7	Q96AV8	911 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	CNBD2	Q96M20	576 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	ACCS	Q96QU6	501 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	LXN	Q9BS40	222 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	DHRS4	Q9BTZ2	278 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	TMOD2	Q9NZR1	351 aa		13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	HEMK1	Q9Y5R4	338 aa	Predicted RBP	13.76	□□□□□ -0.21
PTK7-218	ENST00000493339	PLIN4	Q96Q06	1357 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	NHS	Q6T4R5	1651 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	NDC80	O14777	642 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	DSG3	P32926	999 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	VCP	P55072	806 aa	Known RBP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	YWHAG	P61981	247 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	PTP4A2	Q12974	167 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	ACAP1	Q15027	740 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	TXNRD3NB	Q6F5E7	133 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	PADI6	Q6TGC4	694 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	ADGRG6	Q86SQ4	1221 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	FBXO11	Q86XK2	927 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	CPT1B	Q92523	772 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	SLITRK1	Q96PX8	696 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	PRPF18	Q99633	342 aa	Known RBP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	MRPL1	Q9BYD6	325 aa	Known RBP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	TMEM206	Q9H813	350 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	UBAP1	Q9NZ09	502 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	CNTN3	Q9P232	1028 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	SRP68	Q9UHB9	627 aa	Known RBP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	PACSIN3	Q9UKS6	424 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	POLI	Q9UNA4	740 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	DTNA	Q9Y4J8	743 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	IVNS1ABP	Q9Y6Y0	642 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	DOT1L	Q8TEK3	1739 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	SHMT1	P34896	483 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	EMP3	P54852	163 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	RPL7A	P62424	266 aa	Known RBP	13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	MAMLD1	Q13495	774 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	CIAPIN1	Q6FI81	312 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	TSHZ1	Q6ZSZ6	1077 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	HPS6	Q86YV9	775 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	CRLF3	Q8IUI8	442 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	FBXL13	Q8NEE6	735 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	SETDB2	Q96T68	719 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	SIKE1	Q9BRV8	207 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	YIPF2	Q9BWQ6	316 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	C20orf27	Q9GZN8	174 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	EPB41L1	Q9H4G0	881 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	CD209	Q9NNX6	404 aa		13.75	□□□□□ -0.21
PTK7-218	ENST00000493339	TRPA1	O75762	1119 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	FDFT1	P37268	417 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	NRL	P54845	237 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	BASP1	P80723	227 aa	Known RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	SLC10A5	Q5PT55	438 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	LIN9	Q5TKA1	542 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	NUDCD3	Q8IVD9	361 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	IGDCC3	Q8IVU1	814 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	APOL6	Q9BWW8	343 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	STRA6	Q9BX79	667 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PCDH9	Q9HC56	1237 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	ZBTB21	Q9ULJ3	1066 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PAIP2B	Q9ULR5	123 aa	Known RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	IGLV3-22	A0A075B6J6	115 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	LOC100653049	A0A140TA62	436 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	TRIM49D1	C9J1S8	452 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	SLC16A4	O15374	487 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	KRT34	O76011	436 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	TMEM63A	O94886	807 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	CFB	P00751	764 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	FOS	P01100	380 aa	Predicted RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	SERPINB8	P50452	374 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PRELP	P51888	382 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PPID	Q08752	370 aa	Known RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	OASL	Q15646	514 aa	Known RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	KLHL35	Q6PF15	583 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PPIL6	Q8IXY8	311 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	PDIK1L	Q8N165	341 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	NYX	Q9GZU5	481 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	SH3GLB1	Q9Y371	365 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	DAGLA	Q9Y4D2	1042 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	MYH14	Q7Z406	1995 aa	Known RBP	13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	TCRBV9S1A1T	A0A576	114 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	STRN	O43815	780 aa		13.74	□□□□□ -0.21
PTK7-218	ENST00000493339	DKC1	O60832	514 aa	Known RBP eCLIP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms