RNA–Protein interactions for RNA: ENST00000489402.1

SNX17-207, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 743 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-207ENST00000489402 SIX4Q9UIU6 781 aa10.01□□□□□ -0.81
SNX17-207ENST00000489402 ARHGAP26Q9UNA1 814 aa10.01□□□□□ -0.81
SNX17-207ENST00000489402 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
SNX17-207ENST00000489402 PTPRDP23468 1912 aa10□□□□□ -0.81
SNX17-207ENST00000489402 TRIM66O15016 1216 aa10□□□□□ -0.81
SNX17-207ENST00000489402 ATP2C2O75185 946 aa10□□□□□ -0.81
SNX17-207ENST00000489402 CAVIN2O95810 425 aa10□□□□□ -0.81
SNX17-207ENST00000489402 WARSP23381 471 aaKnown RBP10□□□□□ -0.81
SNX17-207ENST00000489402 LMO2P25791 158 aa10□□□□□ -0.81
SNX17-207ENST00000489402 HOXD13P35453 343 aa10□□□□□ -0.81
SNX17-207ENST00000489402 PPP3CCP48454 512 aa10□□□□□ -0.81
SNX17-207ENST00000489402 CYP27A1Q02318 531 aa10□□□□□ -0.81
SNX17-207ENST00000489402 RESTQ13127 1097 aa10□□□□□ -0.81
SNX17-207ENST00000489402 CUL4AQ13619 759 aa10□□□□□ -0.81
SNX17-207ENST00000489402 USP39Q53GS9 565 aaKnown RBP10□□□□□ -0.81
SNX17-207ENST00000489402 N4BP2L1Q5TBK1 243 aaPredicted RBP10□□□□□ -0.81
SNX17-207ENST00000489402 WDR49Q8IV35 697 aa10□□□□□ -0.81
SNX17-207ENST00000489402 PDILTQ8N807 584 aa10□□□□□ -0.81
SNX17-207ENST00000489402 OR5B17Q8NGF7 314 aa10□□□□□ -0.81
SNX17-207ENST00000489402 KBTBD7Q8WVZ9 684 aa10□□□□□ -0.81
SNX17-207ENST00000489402 FNBP1Q96RU3 617 aa10□□□□□ -0.81
SNX17-207ENST00000489402 EDEM2Q9BV94 578 aa10□□□□□ -0.81
SNX17-207ENST00000489402 TNMDQ9H2S6 317 aa10□□□□□ -0.81
SNX17-207ENST00000489402 SNX25Q9H3E2 840 aa10□□□□□ -0.81
SNX17-207ENST00000489402 CRTAC1Q9NQ79 661 aa10□□□□□ -0.81
SNX17-207ENST00000489402 EPG5Q9HCE0 2579 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 CACNA1BQ00975 2339 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 BCLAF3A2AJT9 711 aaKnown RBP9.99□□□□□ -0.81
SNX17-207ENST00000489402 LEFTY2O00292 366 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SLC9A3R1O14745 358 aaPredicted RBP9.99□□□□□ -0.81
SNX17-207ENST00000489402 TM4SF5O14894 197 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 DCLK1O15075 740 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 EIF3DO15371 548 aaKnown RBP eCLIP9.99□□□□□ -0.815e-6■□□□□ 8.9
SNX17-207ENST00000489402 ZZEF1O43149 2961 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 KCNK5O95279 499 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 ABL1P00519 1130 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 PDGFRBP09619 1106 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 TNNI1P19237 187 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SYT1P21579 422 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 PMLP29590 882 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SEC13P55735 322 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 ZXDBP98169 803 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SLC39A14Q15043 492 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 C2orf27AQ580R0 203 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 MDH1BQ5I0G3 518 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 DAB2IPQ5VWQ8 1189 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 TCEAL6Q6IPX3 200 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 ANO7Q6IWH7 933 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 HS2ST1Q7LGA3 356 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 LIMS2Q7Z4I7 341 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 DDX42Q86XP3 938 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNX17-207ENST00000489402 CBWD2Q8IUF1 395 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SFTPA1Q8IWL2 248 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 KIAA1958Q8N8K9 716 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 MYCBPAPQ8TBZ2 947 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 USP33Q8TEY7 942 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 TCEAL3Q969E4 200 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 ELMO3Q96BJ8 720 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 PCED1BQ96HM7 432 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SLITRK1Q96PX8 696 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 USP28Q96RU2 1077 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 TTLL2Q9BWV7 592 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 LSM14BQ9BX40 385 aaKnown RBP9.99□□□□□ -0.81
SNX17-207ENST00000489402 TPSD1Q9BZJ3 242 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 LINC00597Q9H2U6 94 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 CUEDC2Q9H467 287 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 ZSCAN16Q9H4T2 348 aaPredicted RBP9.99□□□□□ -0.81
SNX17-207ENST00000489402 HSPBP1Q9NZL4 362 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 MORC2Q9Y6X9 1032 aaPredicted RBP9.99□□□□□ -0.81
SNX17-207ENST00000489402 SPEGQ15772 3267 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
SNX17-207ENST00000489402 SDK1Q7Z5N4 2213 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 THADAQ6YHU6 1953 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 F8VP50 259 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 SCAMP3O14828 347 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 ALDH1A2O94788 518 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 CYP17A1P05093 508 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 CENPBP07199 599 aaPredicted RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 DLATP10515 647 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 GNL1P36915 607 aaPredicted RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 OPRD1P41143 372 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 NOVA1P51513 510 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 USP46P62068 366 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 TNNC1P63316 161 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 NOP14P78316 857 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 ASIC1P78348 528 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 SLC7A9P82251 487 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 MRPS21P82921 87 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 SHC2P98077 582 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 AMPD3Q01432 767 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 MESP2Q0VG99 397 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 STK38Q15208 465 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 SNRNP35Q16560 246 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 TDRD10Q5VZ19 366 aaKnown RBP9.98□□□□□ -0.81
SNX17-207ENST00000489402 PMS2CLQ68D20 193 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 TRAPPC11Q7Z392 1133 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 CYP2U1Q7Z449 544 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 FILIP1Q7Z7B0 1213 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 TTC30AQ86WT1 665 aa9.98□□□□□ -0.81
SNX17-207ENST00000489402 OR6B3Q8NGW1 331 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms