RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 BMPR1AP36894 532 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 AARSP49588 968 aaKnown RBP eCLIP13.41□□□□□ -0.26
NELFE-209ENST00000488426 CLCNKBP51801 687 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 DMTNQ08495 405 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 TUSC3Q13454 348 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 CAMK1Q14012 370 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 ZNF268Q14587 947 aaPredicted RBP13.41□□□□□ -0.26
NELFE-209ENST00000488426 UPP1Q16831 310 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 PKDCCQ504Y2 493 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 PPP1R15BQ5SWA1 713 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 CCDC70Q6NSX1 233 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 LLGL2Q6P1M3 1020 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 GLB1LQ6UWU2 654 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 C12orf29Q8N999 325 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 SPATA18Q8TC71 538 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
NELFE-209ENST00000488426 SENP8Q96LD8 212 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 CPXM1Q96SM3 734 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
NELFE-209ENST00000488426 SYNCQ9H7C4 482 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 ALG13Q9NP73 1137 aaKnown RBP13.41□□□□□ -0.26
NELFE-209ENST00000488426 HESX1Q9UBX0 185 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 IP6K2Q9UHH9 426 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 PCDHA3Q9Y5H8 950 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 BDP1A6H8Y1 2624 aa13.41□□□□□ -0.26
NELFE-209ENST00000488426 TMEM191CA6NGB0 347 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 GABRDO14764 452 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 DNAJB1P25685 340 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 SNX16P57768 344 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 C2orf54Q08AI8 447 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 PPP1R26Q5T8A7 1209 aaPredicted RBP13.4□□□□□ -0.26
NELFE-209ENST00000488426 PHLDB2Q86SQ0 1253 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 NPAS4Q8IUM7 802 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 ATXN2LQ8WWM7 1075 aaKnown RBP13.4□□□□□ -0.26
NELFE-209ENST00000488426 ALG3Q92685 438 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 CLP1Q92989 425 aaKnown RBP13.4□□□□□ -0.26
NELFE-209ENST00000488426 TRIM7Q9C029 511 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 ELAC1Q9H777 363 aaKnown RBP13.4□□□□□ -0.26
NELFE-209ENST00000488426 EHD2Q9NZN4 543 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 CASTOR2A6NHX0 329 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 SIGLEC16A6NMB1 481 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 POMCP01189 267 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 BMP1P13497 986 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 CTNNB1P35222 781 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 LHX1P48742 406 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 PEX5P50542 639 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 PSMC1P62191 440 aaKnown RBP13.4□□□□□ -0.26
NELFE-209ENST00000488426 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 CYP4A22Q5TCH4 519 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 DCAF12L1Q5VU92 463 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 DCUN1D2Q6PH85 259 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 XYLT1Q86Y38 959 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 UBA3Q8TBC4 463 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 URGCPQ8TCY9 931 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 KRT35Q92764 455 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 PLVAPQ9BX97 442 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 ANKZF1Q9H8Y5 726 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 FAM49BQ9NUQ9 324 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 TMEM161AQ9NX61 479 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 SMARCAL1Q9NZC9 954 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 TMEM59LQ9UK28 342 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 INPP5FQ9Y2H2 1132 aa13.4□□□□□ -0.26
NELFE-209ENST00000488426 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.4□□□□□ -0.26
NELFE-209ENST00000488426 TSC2P49815 1807 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 ATG2AQ2TAZ0 1938 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 TARSL2A2RTX5 802 aaKnown RBP13.39□□□□□ -0.27
NELFE-209ENST00000488426 ERBB2P04626 1255 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
NELFE-209ENST00000488426 LMO2P25791 158 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 BCAT1P54687 386 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 RWDD2BP57060 319 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 MRPS5P82675 430 aaKnown RBP13.39□□□□□ -0.27
NELFE-209ENST00000488426 PIGHQ14442 188 aaPredicted RBP13.39□□□□□ -0.27
NELFE-209ENST00000488426 WSCD1Q658N2 575 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 OSTM1Q86WC4 334 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 TTC30AQ86WT1 665 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 ANKRD52Q8NB46 1076 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 B3GALNT2Q8NCR0 500 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 C3orf58Q8NDZ4 430 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 FNIP1Q8TF40 1166 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 RUBCNQ92622 972 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 MCEEQ96PE7 176 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 CYLDQ9NQC7 956 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 ARGLU1Q9NWB6 273 aaPredicted RBP13.39□□□□□ -0.27
NELFE-209ENST00000488426 LMCD1Q9NZU5 365 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 KANSL3Q9P2N6 904 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 PCDHB7Q9Y5E2 793 aa13.39□□□□□ -0.27
NELFE-209ENST00000488426 C5orf67F2Z3F1 127 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 CCDC188H7C350 402 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 PSTPIP1O43586 416 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 ODC1P11926 461 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 KRT3P12035 628 aa13.38□□□□□ -0.27
NELFE-209ENST00000488426 RPL7AP62424 266 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms