RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 PRPF4BQ13523 1007 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 DHX8Q14562 1220 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 TMEM31Q5JXX7 168 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 SPECC1Q5M775 1068 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 NT5DC1Q5TFE4 455 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 TDRD10Q5VZ19 366 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 LARP1BQ659C4 914 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 HAUS3Q68CZ6 603 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CDCA2Q69YH5 1023 aaPredicted RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 SLC27A1Q6PCB7 646 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 TMC5Q6UXY8 1006 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 SPATA31D4Q6ZUB0 917 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 DDX53Q86TM3 631 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 ZBTB8OSQ8IWT0 167 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 DAW1Q8N136 415 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 IGSF22Q8N9C0 903 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 MCPH1Q8NEM0 835 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 DEPTORQ8TB45 409 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 PIWIL2Q8TC59 973 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 ANAPC16Q96DE5 110 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 KLHL5Q96PQ7 755 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 GPR62Q9BZJ7 368 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CCDC113Q9H0I3 377 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.49□□□□□ -1.374e-9■■■■□ 21.2
CDHR3-213ENST00000488386 FZD8Q9H461 694 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 POMKQ9H5K3 350 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 GOLGA2P5Q9HBQ8 144 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 NGRNQ9NPE2 291 aaKnown RBP6.49□□□□□ -1.37
CDHR3-213ENST00000488386 PRDM7Q9NQW5 492 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 CNTNAP2Q9UHC6 1331 aa6.49□□□□□ -1.37
CDHR3-213ENST00000488386 C2CD4DB7Z1M9 353 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 LOC730098B7Z3J9 87 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 I3L4J1 428 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PTGESO14684 152 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 SLC16A4O15374 487 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 DCXO43602 365 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 RECQL4O94761 1208 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 SRFP11831 508 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 XRCC6P12956 609 aaKnown RBP eCLIP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 KLRC2P26717 231 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 AXLP30530 894 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 DNAJA1P31689 397 aaKnown RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CCNFP41002 786 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 NAMPTP43490 491 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 NPTX2P47972 431 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 ATP2C1P98194 919 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CEBPZQ03701 1054 aaKnown RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 DSC1Q08554 894 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 NCBP1Q09161 790 aaKnown RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 MAPK7Q13164 816 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 ORC2Q13416 577 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CBX2Q14781 532 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 MAPK6Q16659 721 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 KRT79Q5XKE5 535 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 RINT1Q6NUQ1 792 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PRSS55Q6UWB4 352 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 TMC3Q7Z5M5 1100 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PALB2Q86YC2 1186 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 TP53INP2Q8IXH6 220 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 SLC22A17Q8WUG5 538 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CPLX3Q8WVH0 158 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 SUSD6Q92537 303 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CASP10Q92851 521 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 UBE2FQ969M7 185 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 RPS6KC1Q96S38 1066 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CDCA3Q99618 268 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 TMEM175Q9BSA9 504 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 HERC2P3Q9BVR0 1158 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PHF7Q9BWX1 381 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 C1QTNF1Q9BXJ1 281 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 NFKBIZQ9BYH8 718 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PRMT7Q9NVM4 692 aaPredicted RBP6.48□□□□□ -1.37
CDHR3-213ENST00000488386 PRKAG3Q9UGI9 489 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 ADAMTS6Q9UKP5 1117 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 FAM50BQ9Y247 325 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 CLIC4Q9Y696 253 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 VWA8A3KMH1 1905 aa6.48□□□□□ -1.37
CDHR3-213ENST00000488386 A0A1W2PQH9 124 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 ACKR2O00590 384 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 N4BP3O15049 544 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 SHOXO15266 292 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 TEX28O15482 410 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 MEFVO15553 781 aaPredicted RBP6.47□□□□□ -1.37
CDHR3-213ENST00000488386 RFPL2O75678 378 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 SOD2P04179 222 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 URODP06132 367 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 ASGR2P07307 311 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 MARCKSP29966 332 aaPredicted RBP6.47□□□□□ -1.37
CDHR3-213ENST00000488386 CLCN4P51793 760 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 RNF4P78317 190 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 POU5F1BQ06416 359 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 SPAG1Q07617 926 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 GRIK3Q13003 919 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 IKZF1Q13422 519 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 PDIA5Q14554 519 aa6.47□□□□□ -1.37
CDHR3-213ENST00000488386 KARSQ15046 597 aaKnown RBP6.47□□□□□ -1.37
CDHR3-213ENST00000488386 SF3A1Q15459 793 aaKnown RBP6.47□□□□□ -1.37
CDHR3-213ENST00000488386 FAM187BQ17R55 369 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms