RNA–Protein interactions for RNA: ENST00000488235.1

PCYT1A-215, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-215ENST00000488235 DENND5BQ6ZUT9 1274 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 HS2ST1Q7LGA3 356 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 ERMP1Q7Z2K6 904 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 OR6B3Q8NGW1 331 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 SH3RF2Q8TEC5 729 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 PARD3BQ8TEW8 1205 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 TTLL2Q9BWV7 592 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 B3GNT5Q9BYG0 378 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 RNF38Q9H0F5 515 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 KCTD10Q9H3F6 313 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 ECT2Q9H8V3 914 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 KIF9Q9HAQ2 790 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 NXF1Q9UBU9 619 aaKnown RBP11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 ZMYM5Q9UJ78 669 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 HPSEQ9Y251 543 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 ZFHX4Q86UP3 3567 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 WDFY3Q8IZQ1 3526 aa11.98□□□□□ -0.49
PCYT1A-215ENST00000488235 SPEGQ15772 3267 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 RNF40O75150 1001 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 C4BPAP04003 597 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 USP17L7P0C7H9 530 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 PTPN1P18031 435 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 HDCP19113 662 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 NRLP54845 237 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 SNRPFP62306 86 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 CLDN10P78369 228 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 SPEM2Q0P670 501 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 MESP2Q0VG99 397 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 ORC1Q13415 861 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 GAB4Q2WGN9 574 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 C1orf220Q5T0J3 134 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 ATL3Q6DD88 541 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 VSTM1Q6UX27 236 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 SCARA5Q6ZMJ2 495 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 PAQR9Q6ZVX9 377 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 LONP2Q86WA8 852 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 SFTPA1Q8IWL2 248 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 CEP57L1Q8IYX8 460 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 OSCP1Q8WVF1 389 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 SNX25Q9H3E2 840 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 DUS2Q9NX74 493 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 HMGXB4Q9UGU5 601 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 ARHGAP26Q9UNA1 814 aa11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 R3HCC1Q9Y3T6 440 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 ZNF638Q14966 1978 aaKnown RBP11.97□□□□□ -0.49
PCYT1A-215ENST00000488235 ZNF840PA6NDX5 716 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 SOBPA7XYQ1 873 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 STAU1O95793 577 aaKnown RBP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 PGFP49763 221 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 NDUFA8P51970 172 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 TNNC1P63316 161 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 NOP14P78316 857 aaKnown RBP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 TAF10Q12962 218 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 TRPC3Q13507 836 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 NCOA4Q13772 614 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 PPP2R5DQ14738 602 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 PDGFRLQ15198 375 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 CC2D1AQ6P1N0 951 aaPredicted RBP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 DGLUCYQ7Z3D6 616 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 SYNPOQ8N3V7 929 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 C8orf48Q96LL4 319 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 KCNK16Q96T55 309 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 CFAP45Q9UL16 551 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 USP18Q9UMW8 372 aa11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
PCYT1A-215ENST00000488235 EPG5Q9HCE0 2579 aa11.96□□□□□ -0.5
PCYT1A-215ENST00000488235 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.5
PCYT1A-215ENST00000488235 A8MXQ7 604 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 LEFTY2O00292 366 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 TRIM66O15016 1216 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 OLFM2O95897 454 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 CMA1P23946 247 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 HOXA6P31267 233 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 GRSF1Q12849 480 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 IFRD2Q12894 506 aaPredicted RBP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 BIRC3Q13489 604 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 PUM1Q14671 1186 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 KCNB1Q14721 858 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 MAPRE1Q15691 268 aaKnown RBP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 CCDC6Q16204 474 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 ZNF699Q32M78 642 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 LAIR1Q6GTX8 287 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 SPOPLQ6IQ16 392 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 WDR5BQ86VZ2 330 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 SLC9A9Q8IVB4 645 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 FAM160A2Q8N612 972 aaPredicted RBP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 SCAMP5Q8TAC9 235 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 HHIPQ96QV1 700 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 P2RY13Q9BPV8 354 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 GOLPH3LQ9H4A5 285 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 VRTNQ9H8Y1 702 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 SMPD4Q9NXE4 827 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 TRPM5Q9NZQ8 1165 aa11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 CGNQ9P2M7 1197 aaKnown RBP11.95□□□□□ -0.5
PCYT1A-215ENST00000488235 FAM237AA0A1B0GTK4 181 aa11.94□□□□□ -0.5
PCYT1A-215ENST00000488235 TNFRSF10BO14763 440 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms