RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ATP2A3Q93084 1043 aa2.95□□□□□ -1.94
USP9X-208ENST00000487625 HDAC10Q969S8 669 aa2.95□□□□□ -1.94
USP9X-208ENST00000487625 MRPS18AQ9NVS2 196 aaKnown RBP2.95□□□□□ -1.94
USP9X-208ENST00000487625 ETAA1Q9NY74 926 aa2.95□□□□□ -1.94
USP9X-208ENST00000487625 NIPSNAP3AQ9UFN0 247 aaPredicted RBP2.95□□□□□ -1.94
USP9X-208ENST00000487625 SAP30BPQ9UHR5 308 aaKnown RBP2.95□□□□□ -1.94
USP9X-208ENST00000487625 ZSCAN21Q9Y5A6 473 aaPredicted RBP2.95□□□□□ -1.94
USP9X-208ENST00000487625 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.95□□□□□ -1.94
USP9X-208ENST00000487625 CCDC154A6NI56 674 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PPM1DO15297 605 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA12O60330 932 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 NOVP48745 357 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 RAB39AQ14964 217 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 ACAP2Q15057 778 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 VPS53Q5VIR6 699 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PGM2L1Q6PCE3 622 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 SLC30A10Q6XR72 485 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 GADL1Q6ZQY3 521 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 MIB2Q96AX9 1013 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 CLPTM1LQ96KA5 538 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 SMOQ99835 787 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 SERPINB13Q9UIV8 391 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 TMA7Q9Y2S6 64 aaKnown RBP2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA9Q9Y5G4 932 aaKnown RBP2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA8Q9Y5G5 932 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA7Q9Y5G6 932 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA6Q9Y5G7 932 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 PCDHGA3Q9Y5H0 932 aa2.94□□□□□ -1.94
USP9X-208ENST00000487625 IGLV5-39A0A0G2JS06 123 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 TCRBV5S1A1TA0A578 114 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 NT5C1B-RDH14C9J2C7 533 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 F2RL2O00254 374 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 POLRMTO00411 1230 aaKnown RBP2.93□□□□□ -1.94
USP9X-208ENST00000487625 EXOC3O60645 756 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 CHRM3P20309 590 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 RENBPP51606 427 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 SLC16A1P53985 500 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 PSMC1P62191 440 aaKnown RBP2.93□□□□□ -1.94
USP9X-208ENST00000487625 CFHR1Q03591 330 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 MTX1Q13505 466 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 ABCB5Q2M3G0 1257 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 CCDC93Q567U6 631 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 MPLKIPQ8TAP9 179 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 OSR1Q8TAX0 266 aaPredicted RBP2.93□□□□□ -1.94
USP9X-208ENST00000487625 NSUN6Q8TEA1 469 aaKnown RBP2.93□□□□□ -1.94
USP9X-208ENST00000487625 NEUROG1Q92886 237 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 SNX18Q96RF0 628 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 VRK1Q99986 396 aaPredicted RBP2.93□□□□□ -1.94
USP9X-208ENST00000487625 C1QTNF5Q9BXJ0 243 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 TMEM8AQ9HCN3 771 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 CD93Q9NPY3 652 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 MKS1Q9NXB0 559 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 CALCOCO1Q9P1Z2 691 aa2.93□□□□□ -1.94
USP9X-208ENST00000487625 SCN5AQ14524 2016 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 PRSS29PA6NIE9 313 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 ZNF785A8K8V0 405 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 PDE8BO95263 885 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 ANXA1P04083 346 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 MALP21145 153 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 ARRB2P32121 409 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 KIF23Q02241 960 aaPredicted RBP2.92□□□□□ -1.94
USP9X-208ENST00000487625 SNAPC2Q13487 334 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 KHDC1Q4VXA5 237 aaKnown RBP2.92□□□□□ -1.94
USP9X-208ENST00000487625 TREML2Q5T2D2 321 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 TAF2Q6P1X5 1199 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 SERPINA13PQ6UXR4 307 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 DTX2Q86UW9 622 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 DDX42Q86XP3 938 aaKnown RBP eCLIP2.92□□□□□ -1.94
USP9X-208ENST00000487625 AOPEPQ8N6M6 819 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 TERB1Q8NA31 727 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 PSD4Q8NDX1 1056 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 MAP4K1Q92918 833 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 SCAMP4Q969E2 229 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 COA7Q96BR5 231 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 FAXDC2Q96IV6 333 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 THAP7Q9BT49 309 aaPredicted RBP2.92□□□□□ -1.94
USP9X-208ENST00000487625 PUS7LQ9H0K6 701 aaKnown RBP2.92□□□□□ -1.94
USP9X-208ENST00000487625 MYLK2Q9H1R3 596 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 SLC5A4Q9NY91 659 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 AGAP1Q9UPQ3 857 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 SH2B3Q9UQQ2 575 aa2.92□□□□□ -1.94
USP9X-208ENST00000487625 A0A1W2PNU3 283 aaPredicted RBP2.91□□□□□ -1.94
USP9X-208ENST00000487625 LRRC14BA6NHZ5 514 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 TMEM232C9JQI7 657 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 XPOTO43592 962 aaKnown RBP2.91□□□□□ -1.94
USP9X-208ENST00000487625 GJB1P08034 283 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 MYBL2P10244 700 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 CTSAP10619 480 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 CD6P30203 668 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 CDC25AP30304 524 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 TOB1P50616 345 aaPredicted RBP2.91□□□□□ -1.94
USP9X-208ENST00000487625 ZNF135P52742 658 aaPredicted RBP2.91□□□□□ -1.94
USP9X-208ENST00000487625 DSC2Q02487 901 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 PCBP2Q15366 365 aaKnown RBP eCLIP2.91□□□□□ -1.94
USP9X-208ENST00000487625 SLC4A10Q6U841 1118 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 PDSS2Q86YH6 399 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 LRRC71Q8N4P6 559 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 TEKT5Q96M29 485 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 C1orf43Q9BWL3 253 aa2.91□□□□□ -1.94
USP9X-208ENST00000487625 BRD9Q9H8M2 597 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms