RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 SMYD3Q9H7B4 428 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 DUS2Q9NX74 493 aaKnown RBP25.14■■□□□ 1.62
PLOD3-215ENST00000487563 GMEB2Q9UKD1 530 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 ZDHHC9Q9Y397 364 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 NME7Q9Y5B8 376 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 NDUFA8P51970 172 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 USP46P62068 366 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 CEP135Q66GS9 1140 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 SH3RF2Q8TEC5 729 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 C8orf48Q96LL4 319 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 ZNF518BQ9C0D4 1074 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 SCAND2PQ9GZW5 306 aaPredicted RBP25.13■■□□□ 1.61
PLOD3-215ENST00000487563 KCTD10Q9H3F6 313 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 DMAC2Q9NW81 257 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 GCNT4Q9P109 453 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 FRMD4BQ9Y2L6 1034 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 WNT6Q9Y6F9 365 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 PTPRDP23468 1912 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 ZNF292O60281 2723 aa25.13■■□□□ 1.61
PLOD3-215ENST00000487563 ATP8B3O60423 1300 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 GPR179Q6PRD1 2367 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 OTOL1A6NHN0 477 aaPredicted RBP25.12■■□□□ 1.61
PLOD3-215ENST00000487563 CHURC1-FNTBB4DL54 471 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 CALUO43852 315 aaPredicted RBP25.12■■□□□ 1.61
PLOD3-215ENST00000487563 PAPSS2O95340 614 aaPredicted RBP25.12■■□□□ 1.61
PLOD3-215ENST00000487563 FNTBP49356 437 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 IFRD2Q12894 506 aaPredicted RBP25.12■■□□□ 1.61
PLOD3-215ENST00000487563 TMEM196Q5HYL7 178 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 HEATR6Q6AI08 1181 aaKnown RBP25.12■■□□□ 1.61
PLOD3-215ENST00000487563 PRR23BQ6ZRT6 265 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 OSCP1Q8WVF1 389 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 ATP2A3Q93084 1043 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 MED10Q9BTT4 135 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 TTLL2Q9BWV7 592 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 VRTNQ9H8Y1 702 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 GREB1Q4ZG55 1949 aa25.12■■□□□ 1.61
PLOD3-215ENST00000487563 CLDN5O00501 218 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 ABL1P00519 1130 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 P4HA1P13674 534 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 RAP1GAPP47736 663 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 CDH8P55286 799 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 NOP14P78316 857 aaKnown RBP25.11■■□□□ 1.61
PLOD3-215ENST00000487563 CLDN10P78369 228 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 LPAL2Q16609 132 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 FSTL4Q6MZW2 842 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 TNIP3Q96KP6 325 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 SLITRK1Q96PX8 696 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 B3GNT5Q9BYG0 378 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 ECT2Q9H8V3 914 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 ARHGAP26Q9UNA1 814 aa25.11■■□□□ 1.61
PLOD3-215ENST00000487563 ANAPC1Q9H1A4 1944 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 TRDMT1O14717 391 aaKnown RBP25.1■■□□□ 1.61
PLOD3-215ENST00000487563 C4BPAP04003 597 aaKnown RBP25.1■■□□□ 1.61
PLOD3-215ENST00000487563 PRR29P0C7W0 189 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 PFKLP17858 780 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 PPP3CCP48454 512 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 DLG4P78352 724 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 DMWDQ09019 674 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 LONP2Q86WA8 852 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 GPR161Q8N6U8 529 aaKnown RBP25.1■■□□□ 1.61
PLOD3-215ENST00000487563 TMEM174Q8WUU8 243 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 P2RY13Q9BPV8 354 aa25.1■■□□□ 1.61
PLOD3-215ENST00000487563 WDR87Q6ZQQ6 2873 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 K7ESF4 209 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 ATG13O75143 517 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 VNN1O95497 513 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 GJA4P35212 333 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 CACNA2D1P54289 1103 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 FOXK2Q01167 660 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 NR1H3Q13133 447 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 SIM2Q14190 667 aaPredicted RBP25.09■■□□□ 1.61
PLOD3-215ENST00000487563 TMC2Q8TDI7 906 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 ELMO3Q96BJ8 720 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 RMDN1Q96DB5 314 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 C2orf42Q9NWW7 574 aa25.09■■□□□ 1.61
PLOD3-215ENST00000487563 HELZP42694 1942 aaKnown RBP25.08■■□□□ 1.61
PLOD3-215ENST00000487563 FAM237AA0A1B0GTK4 181 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 A0A1W2PQ27 194 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 A0A1W2PQ64 194 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 A0A1W2PQD8 194 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 ZNF840PA6NDX5 716 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 RHOBTB3O94955 611 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 EGFP01133 1207 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 TCF3P15923 654 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 DRD1P21728 446 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 CNR2P34972 360 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 PIK3CAP42336 1068 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 TAF10Q12962 218 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 SGSM1Q2NKQ1 1148 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 EML3Q32P44 896 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 ZACNQ401N2 412 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 LAIR1Q6GTX8 287 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 KRBA2Q6ZNG9 492 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 ERMP1Q7Z2K6 904 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 FAM35AQ86V20 835 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 NUP93Q8N1F7 819 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 CHFRQ96EP1 664 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 USP18Q9UMW8 372 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 TRAF3IP3Q9Y228 551 aa25.08■■□□□ 1.61
PLOD3-215ENST00000487563 RNF40O75150 1001 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms