RNA–Protein interactions for RNA: ENST00000487447.1

CLIP2-207, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-207ENST00000487447 O00370 1275 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 VDRP11473 427 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 ATP1A3P13637 1013 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 RFX1P22670 979 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 CDC25CP30307 473 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 GRIK1P39086 918 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 CDR1P51861 262 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 MTMR3Q13615 1198 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 MEA1Q16626 185 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 ZNF394Q53GI3 561 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 PPP1R26Q5T8A7 1209 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-207ENST00000487447 CLEC20AQ6ZU45 233 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 HFE2Q6ZVN8 426 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 RNF135Q8IUD6 432 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 CREBRFQ8IUR6 639 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 GPR152Q8TDT2 470 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 GIPC2Q8TF65 315 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 NXPE3Q969Y0 559 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 NAA15Q9BXJ9 866 aaKnown RBP12.36□□□□□ -0.43
CLIP2-207ENST00000487447 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 GPR88Q9GZN0 384 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 VPS16Q9H269 839 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 TRPV4Q9HBA0 871 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 KRT82Q9NSB4 513 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 FAM49BQ9NUQ9 324 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 COMMD8Q9NX08 183 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 IGSF9Q9P2J2 1179 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 UXTQ9UBK9 157 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-207ENST00000487447 ZMYM5Q9UJ78 669 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 AJAP1Q9UKB5 411 aaPredicted RBP12.36□□□□□ -0.43
CLIP2-207ENST00000487447 SIK3Q9Y2K2 1263 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 MYH10P35580 1976 aa12.36□□□□□ -0.43
CLIP2-207ENST00000487447 A0A1W2PRU2 124 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 BECN2A8MW95 431 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 AP1G2O75843 785 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 BEST1O76090 585 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 FAM200BP0CF97 657 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 MYL4P12829 197 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 NPR3P17342 541 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 FCARP24071 287 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 ANXA13P27216 316 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 GABRR2P28476 465 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 GBP2P32456 591 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-207ENST00000487447 MFAP3P55082 362 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 USP46P62068 366 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 APBA1Q02410 837 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 HTR4Q13639 388 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 PKDCCQ504Y2 493 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 KLHDC7AQ5VTJ3 777 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 SDHAF4Q5VUM1 108 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 GJB7Q6PEY0 223 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 TMEM270Q6UE05 265 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 NUP93Q8N1F7 819 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 RBBP8NLQ8NC74 664 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-207ENST00000487447 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 ERGIC2Q96RQ1 377 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 KCNK16Q96T55 309 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 ZSWIM1Q9BR11 485 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 GANQ9H2C0 597 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 UBE2TQ9NPD8 197 aaPredicted RBP12.35□□□□□ -0.43
CLIP2-207ENST00000487447 PCDHB4Q9Y5E5 795 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 PIEZO1Q92508 2521 aa12.35□□□□□ -0.43
CLIP2-207ENST00000487447 RTN3O95197 1032 aaPredicted RBP12.34□□□□□ -0.43
CLIP2-207ENST00000487447 TPM2P07951 284 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 PFKLP17858 780 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 DDX6P26196 483 aaKnown RBP eCLIP12.34□□□□□ -0.437e-8■■■■■ 33.3
CLIP2-207ENST00000487447 PPP3CCP48454 512 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 SLC5A3P53794 718 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 ZNF445P59923 1031 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 STILQ15468 1287 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 TEAD2Q15562 447 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 CNGA2Q16280 664 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 PTPN21Q16825 1174 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 SGO2Q562F6 1265 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 SNX30Q5VWJ9 437 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 LRSAM1Q6UWE0 723 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 LCLAT1Q6UWP7 414 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 MTSS1LQ765P7 747 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 TTC30AQ86WT1 665 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 ANKRD52Q8NB46 1076 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 STKLD1Q8NE28 680 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 ING5Q8WYH8 240 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 OVCA2Q8WZ82 227 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 TFAP2BQ92481 460 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 HEXIM2Q96MH2 286 aaKnown RBP12.34□□□□□ -0.43
CLIP2-207ENST00000487447 ASB16Q96NS5 453 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 DNAJC12Q9UKB3 198 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
CLIP2-207ENST00000487447 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.34□□□□□ -0.43
CLIP2-207ENST00000487447 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ECI2O75521 394 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 OLFM2O95897 454 aa12.33□□□□□ -0.44
CLIP2-207ENST00000487447 ZDHHC11BP0C7U3 371 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms