RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	ZNF667	Q5HYK9	610 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	LAIR1	Q6GTX8	287 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	FSTL4	Q6MZW2	842 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	CEP68	Q76N32	757 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	DGLUCY	Q7Z3D6	616 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	SLC9A9	Q8IVB4	645 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	B3GALNT2	Q8NCR0	500 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	KIAA0895	Q8NCT3	520 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	RIN3	Q8TB24	985 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	PARD3B	Q8TEW8	1205 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	P2RY13	Q9BPV8	354 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	MED10	Q9BTT4	135 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	B3GNT5	Q9BYG0	378 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	GZF1	Q9H116	711 aa	Predicted RBP	13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	XYLT2	Q9H1B5	865 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	DPEP3	Q9H4B8	488 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	DMAC2	Q9NW81	257 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	ARHGAP26	Q9UNA1	814 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	SLC8A2	Q9UPR5	921 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	FRMD4B	Q9Y2L6	1034 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	ATP6V1D	Q9Y5K8	247 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	WNT6	Q9Y6F9	365 aa		13.26	□□□□□ -0.29
SREBF1-215	ENST00000487401	ZNF840P	A6NDX5	716 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	CLDN5	O00501	218 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	HR	O43593	1189 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	EGF	P01133	1207 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	C4BPA	P04003	597 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	NR3C1	P04150	777 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	RPN1	P04843	607 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	RET	P07949	1114 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	HOXA6	P31267	233 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	GJA4	P35212	333 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	CDH8	P55286	799 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	NOP14	P78316	857 aa	Known RBP	13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	LMNB2	Q03252	620 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	USP4	Q13107	963 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	CEP135	Q66GS9	1140 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	PLEKHO2	Q8TD55	490 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	CHFR	Q96EP1	664 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	TNIP3	Q96KP6	325 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	SLITRK1	Q96PX8	696 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	TTLL2	Q9BWV7	592 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	ZNF518B	Q9C0D4	1074 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	KCTD10	Q9H3F6	313 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	SMYD3	Q9H7B4	428 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	VRTN	Q9H8Y1	702 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	C2orf42	Q9NWW7	574 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	HPSE	Q9Y251	543 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	NME7	Q9Y5B8	376 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	GVINP1	Q7Z2Y8	2422 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	MYH11	P35749	1972 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	MYH15	Q9Y2K3	1946 aa		13.25	□□□□□ -0.29
SREBF1-215	ENST00000487401	PRR5-ARHGAP8	B1AHC4	643 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	LEFTY2	O00292	366 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	RNF40	O75150	1001 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	RTN3	O95197	1032 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	NFATC1	O95644	943 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	TCF3	P15923	654 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	YWHAQ	P27348	245 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	RAP1GAP	P47736	663 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	NDUFA8	P51970	172 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	CLDN10	P78369	228 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	ARHGAP8	P85298	464 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	IFRD2	Q12894	506 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	TAF10	Q12962	218 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	SRSF5	Q13243	272 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	SGSM1	Q2NKQ1	1148 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	EML3	Q32P44	896 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	FBXO43	Q4G163	708 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	SCARA5	Q6ZMJ2	495 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	WDR5B	Q86VZ2	330 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	NUP93	Q8N1F7	819 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	TMC2	Q8TDI7	906 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	TMEM174	Q8WUU8	243 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	CD101	Q93033	1021 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	LINC00597	Q9H2U6	94 aa		13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	FBRSL1	Q9HCM7	1045 aa	Known RBP	13.24	□□□□□ -0.29
SREBF1-215	ENST00000487401	FAM186A	A6NE01	2351 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	PDCD11	Q14690	1871 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	VNN1	O95497	513 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	TRIM21	P19474	475 aa	Known RBP	13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	CACNA2D1	P54289	1103 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	SLC7A9	P82251	487 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	SPEM2	Q0P670	501 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	PKN3	Q6P5Z2	889 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	PDZD8	Q8NEN9	1154 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	CCDC26	Q8TAB7	109 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	TAF4B	Q92750	862 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	FBXO32	Q969P5	355 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	CCDC34	Q96HJ3	373 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	CHAMP1	Q96JM3	812 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	SMPD4	Q9NXE4	827 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	ZDHHC9	Q9Y397	364 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	CPQ	Q9Y646	472 aa		13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	EP300	Q09472	2414 aa	Predicted RBP	13.23	□□□□□ -0.29
SREBF1-215	ENST00000487401	ZNF292	O60281	2723 aa		13.22	□□□□□ -0.29
SREBF1-215	ENST00000487401	FRYL	O94915	3013 aa		13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms