RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 LMO2P25791 158 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 USP46P62068 366 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 CRY1Q16526 586 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 LMBRD2Q68DH5 695 aaPredicted RBP20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 VSTM1Q6UX27 236 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 DPH6Q7L8W6 267 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 LIMS2Q7Z4I7 341 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 PCIF1Q9H4Z3 704 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 CDH9Q9ULB4 789 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 PCDHB13Q9Y5F0 798 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 HELZP42694 1942 aaKnown RBP20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 PTPRJQ12913 1337 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 CYP17A1P05093 508 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 HNRNPLP14866 589 aaKnown RBP eCLIP20.79■□□□□ 0.924e-7■■■■■ 36.9
SMPDL3A-202ENST00000487215 PFKLP17858 780 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 SPINK2P20155 84 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 CSRP1P21291 193 aaKnown RBP20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 BDNFP23560 247 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 DHPSP49366 369 aaPredicted RBP20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 MYO1EQ12965 1108 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 RRAGBQ5VZM2 374 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 TMEM92Q6UXU6 159 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 DENND5BQ6ZUT9 1274 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 SV2BQ7L1I2 683 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 FILIP1Q7Z7B0 1213 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 OR5B17Q8NGF7 314 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 OLIG1Q8TAK6 271 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 INTS13Q9NVM9 706 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 TRPM5Q9NZQ8 1165 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 FBXO2Q9UK22 296 aaPredicted RBP20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 ZMIZ1Q9ULJ6 1067 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 CLIC4Q9Y696 253 aa20.79■□□□□ 0.92
SMPDL3A-202ENST00000487215 TOP3BO95985 862 aaKnown RBP20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 CHRM1P11229 460 aaPredicted RBP20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 CEACAM1P13688 526 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 IDEP14735 1019 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 GRIK1P39086 918 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 IRX4P78413 519 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 MRPS21P82921 87 aaKnown RBP20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 ALCAMQ13740 583 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 TTC30AQ86WT1 665 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 SFTPA1Q8IWL2 248 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 GPD1LQ8N335 351 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 PIGKQ92643 395 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 HPDLQ96IR7 371 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 ANKRD36BP1Q96IX9 119 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 CEP295NLQ96MC4 621 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 TTLL2Q9BWV7 592 aa20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 TMEM121BQ9BXQ6 578 aaPredicted RBP20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 R3HCC1Q9Y3T6 440 aaKnown RBP20.78■□□□□ 0.92
SMPDL3A-202ENST00000487215 NUP205Q92621 2012 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 FRMD3A2A2Y4 597 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 ZNF840PA6NDX5 716 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 ANXA13P27216 316 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 SLC6A11P48066 632 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 SLC7A9P82251 487 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 CYP27A1Q02318 531 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 MESP2Q0VG99 397 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 MAPRE1Q15691 268 aaKnown RBP20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 ALLCQ8N6M5 410 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 KIAA1958Q8N8K9 716 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 KDF1Q8NAX2 398 aaPredicted RBP20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 PCED1BQ96HM7 432 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 ADAM33Q9BZ11 813 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 RNF38Q9H0F5 515 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 CPQQ9Y646 472 aa20.77■□□□□ 0.92
SMPDL3A-202ENST00000487215 SCAMP3O14828 347 aaKnown RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 ALDH1A2O94788 518 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 PRPF6O94906 941 aaKnown RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 OLFM2O95897 454 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 PDGFRBP09619 1106 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 WARSP23381 471 aaKnown RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 P2RY2P41231 377 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 DHCR24Q15392 516 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 UAP1L1Q3KQV9 507 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 ADGRG2Q8IZP9 1017 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 ABCA7Q8IZY2 2146 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 IL17RCQ8NAC3 791 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 TXNDC5Q8NBS9 432 aaKnown RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 RLN3Q8WXF3 142 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 CLIC6Q96NY7 704 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 SMPD4Q9NXE4 827 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 EHD2Q9NZN4 543 aa20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 EVLQ9UI08 416 aaPredicted RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 SRPRBQ9Y5M8 271 aaKnown RBP20.76■□□□□ 0.91
SMPDL3A-202ENST00000487215 F8VP50 259 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 SGK1O00141 431 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 TRIM66O15016 1216 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 KLF8O95600 359 aaPredicted RBP20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 TNNC2P02585 160 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 TIE1P35590 1138 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 TXLNAP40222 546 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 NOP14P78316 857 aaKnown RBP20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 TRIM61Q5EBN2 209 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 LPCAT2Q7L5N7 544 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 C12orf40Q86WS4 652 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 DEFB124Q8NES8 71 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 MYCBPAPQ8TBZ2 947 aa20.75■□□□□ 0.91
SMPDL3A-202ENST00000487215 WHAMMQ8TF30 809 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms