RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ERMP1Q7Z2K6 904 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 SH3RF2Q8TEC5 729 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 OSCP1Q8WVF1 389 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 ECT2Q9H8V3 914 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 TMEM30AQ9NV96 361 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 GREB1Q4ZG55 1949 aa26.18■■□□□ 1.78
LIME1-206ENST00000487026 CLSTN1O94985 981 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 EGFP01133 1207 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 FAM163BP0C2L3 166 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 CMA1P23946 247 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 ATICP31939 592 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 GJA4P35212 333 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 FOXK2Q01167 660 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 SIM2Q14190 667 aaPredicted RBP26.17■■□□□ 1.78
LIME1-206ENST00000487026 LONP2Q86WA8 852 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 GOLGA5Q8TBA6 731 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 PARD3BQ8TEW8 1205 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 SYAP1Q96A49 352 aaPredicted RBP26.17■■□□□ 1.78
LIME1-206ENST00000487026 SPATA32Q96LK8 384 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 B3GNT5Q9BYG0 378 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 ZNF518BQ9C0D4 1074 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 LINC00597Q9H2U6 94 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 SMYD3Q9H7B4 428 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 POLR3BQ9NW08 1133 aaPredicted RBP26.17■■□□□ 1.78
LIME1-206ENST00000487026 DMAC2Q9NW81 257 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 TRPM5Q9NZQ8 1165 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 GMEB2Q9UKD1 530 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 ANAPC1Q9H1A4 1944 aa26.17■■□□□ 1.78
LIME1-206ENST00000487026 TRIM66O15016 1216 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 STAU1O95793 577 aaKnown RBP26.16■■□□□ 1.78
LIME1-206ENST00000487026 TGM1P22735 817 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 RAP1GAPP47736 663 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 IFNAR2P48551 515 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 ZXDBP98169 803 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 USP4Q13107 963 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 PSMD2Q13200 908 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 RSPO4Q2I0M5 234 aaPredicted RBP26.16■■□□□ 1.78
LIME1-206ENST00000487026 C8orf48Q96LL4 319 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 KCTD10Q9H3F6 313 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 PARD6AQ9NPB6 346 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 ATG2BQ96BY7 2078 aa26.16■■□□□ 1.78
LIME1-206ENST00000487026 ABL1P00519 1130 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 C4BPAP04003 597 aaKnown RBP26.15■■□□□ 1.78
LIME1-206ENST00000487026 PXNP49023 591 aaPredicted RBP26.15■■□□□ 1.78
LIME1-206ENST00000487026 DLG4P78352 724 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 AMPD2Q01433 879 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 IFRD2Q12894 506 aaPredicted RBP26.15■■□□□ 1.78
LIME1-206ENST00000487026 EML3Q32P44 896 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 CPA6Q8N4T0 437 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 B3GALNT2Q8NCR0 500 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 CEP295NLQ96MC4 621 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 P2RY13Q9BPV8 354 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 TTLL2Q9BWV7 592 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 USP18Q9UMW8 372 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 HPSEQ9Y251 543 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 PTPRDP23468 1912 aa26.15■■□□□ 1.78
LIME1-206ENST00000487026 RNF40O75150 1001 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 VNN1O95497 513 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 NCOA4Q13772 614 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 ZNF699Q32M78 642 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 LAIR1Q6GTX8 287 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 SCARA5Q6ZMJ2 495 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 DGLUCYQ7Z3D6 616 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 GPR161Q8N6U8 529 aaKnown RBP26.14■■□□□ 1.78
LIME1-206ENST00000487026 RNF38Q9H0F5 515 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 ARHGAP26Q9UNA1 814 aa26.14■■□□□ 1.78
LIME1-206ENST00000487026 ZNF840PA6NDX5 716 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 NR3C1P04150 777 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 RPN1P04843 607 aaKnown RBP26.13■■□□□ 1.77
LIME1-206ENST00000487026 NOP14P78316 857 aaKnown RBP26.13■■□□□ 1.77
LIME1-206ENST00000487026 CLDN10P78369 228 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 KRT85P78386 507 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 SPEM2Q0P670 501 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 TAF10Q12962 218 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 PUM1Q14671 1186 aaKnown RBP eCLIP26.13■■□□□ 1.77
LIME1-206ENST00000487026 ZNF667Q5HYK9 610 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 SLC9A9Q8IVB4 645 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 ATP2A3Q93084 1043 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 ELOVL4Q9GZR5 314 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 SDCBP2Q9H190 292 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 DLL3Q9NYJ7 618 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 USP25Q9UHP3 1055 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 CACNA1AO00555 2505 aa26.13■■□□□ 1.77
LIME1-206ENST00000487026 LEFTY2O00292 366 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 PDXKO00764 312 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 PRR29P0C7W0 189 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 DRD1P21728 446 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 NDUFA8P51970 172 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 AP3M2P53677 418 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 WDR5BQ86VZ2 330 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 KCNK16Q96T55 309 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 VRTNQ9H8Y1 702 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 EHD2Q9NZN4 543 aa26.12■■□□□ 1.77
LIME1-206ENST00000487026 HOXA6P31267 233 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 CNR2P34972 360 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 SYKP43405 635 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 CEP135Q66GS9 1140 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 CEP68Q76N32 757 aa26.11■■□□□ 1.77
LIME1-206ENST00000487026 EZH1Q92800 747 aaPredicted RBP26.11■■□□□ 1.77
LIME1-206ENST00000487026 CD101Q93033 1021 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms