RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 HDCP19113 662 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 PIK3CAP42336 1068 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 PRCPP42785 496 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 GCLMP48507 274 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 CACNA2D1P54289 1103 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 PPP3CAQ08209 521 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 RUNX3Q13761 415 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 COBLL1Q53SF7 1204 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 SPOPLQ6IQ16 392 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 CC2D1AQ6P1N0 951 aaPredicted RBP19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 TXNDC11Q6PKC3 985 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 UNC93AQ86WB7 457 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 CRYBG2Q8N1P7 616 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 ARL14EPQ8N8R7 260 aaPredicted RBP19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 TMEM30AQ9NV96 361 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 HOOK1Q9UJC3 728 aaKnown RBP19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 PCDHA5Q9Y5H7 936 aa19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 ZFHX2Q9C0A1 2572 aaPredicted RBP19.58■□□□□ 0.72
PRPF40A-209ENST00000486100 ATP8B3O60423 1300 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 CETN3O15182 167 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 CKMP06732 381 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 GTF2H1P32780 548 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 PDE6CP51160 858 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 LRRC32Q14392 662 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 PAQR9Q6ZVX9 377 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 ACOT1Q86TX2 421 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 ELOA2Q8IYF1 753 aaPredicted RBP19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 NUP93Q8N1F7 819 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 RIN3Q8TB24 985 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 SMARCE1Q969G3 411 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 MED10Q9BTT4 135 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 GTPBP4Q9BZE4 634 aaKnown RBP19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 IMPG2Q9BZV3 1241 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 EBF3Q9H4W6 596 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 TMEM8AQ9HCN3 771 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 HPS4Q9NQG7 708 aa19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 PRMT8Q9NR22 394 aaPredicted RBP19.57■□□□□ 0.72
PRPF40A-209ENST00000486100 F5P12259 2224 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 USP34Q70CQ2 3546 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 ZNF840PA6NDX5 716 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 LMNAP02545 664 aaKnown RBP19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 TCF3P15923 654 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 ASPAP45381 313 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 NDST1P52848 882 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 TAF10Q12962 218 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 MTF1Q14872 753 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 PON2Q15165 354 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 PDGFRLQ15198 375 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 ZNF77Q15935 545 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 DGKKQ5KSL6 1271 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 KRT39Q6A163 491 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 TRIM68Q6AZZ1 485 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 FAM35AQ86V20 835 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 TAS1R2Q8TE23 839 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 ERCC4Q92889 916 aaPredicted RBP19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 EEF2KMTQ96G04 330 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 KCNK16Q96T55 309 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 CYP3A43Q9HB55 503 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 ARHGAP26Q9UNA1 814 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 COL4A2P08572 1712 aa19.56■□□□□ 0.72
PRPF40A-209ENST00000486100 RTN3O95197 1032 aaPredicted RBP19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 EPB41P11171 864 aaKnown RBP19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 YWHAQP27348 245 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 AMPD2Q01433 879 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 WDR44Q5JSH3 913 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 FUKQ8N0W3 1084 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 SH3RF2Q8TEC5 729 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 OSCP1Q8WVF1 389 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 NELL1Q92832 810 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 SMARCD1Q96GM5 515 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 SLITRK1Q96PX8 696 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 TSG101Q99816 390 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 MMRN2Q9H8L6 949 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 APOBEC3GQ9HC16 384 aaKnown RBP19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.55■□□□□ 0.721e-6■■■■■ 38.5
PRPF40A-209ENST00000486100 RBM12Q9NTZ6 932 aaKnown RBP19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 ZSCAN32Q9NX65 697 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 MYO15AQ9UKN7 3530 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 PCDHGA2Q9Y5H1 932 aa19.55■□□□□ 0.72
PRPF40A-209ENST00000486100 NUP210Q8TEM1 1887 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 OTOL1A6NHN0 477 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 STX10O60499 249 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 ARSAP15289 507 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 CCR3P51677 355 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 FKBP3Q00688 224 aaKnown RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 USP4Q13107 963 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 GAS6Q14393 721 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 PPP2R5DQ14738 602 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 ANKRD40Q6AI12 368 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 TSSK4Q6SA08 328 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 ADSSL1Q8N142 457 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 SYNPOQ8N3V7 929 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 SPEM1Q8N4L4 309 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 ZBTB44Q8NCP5 570 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 CCDC150Q8NCX0 1101 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 ATRIPQ8WXE1 791 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 FAM126AQ9BYI3 521 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 RNF38Q9H0F5 515 aa19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 DMAP1Q9NPF5 467 aaPredicted RBP19.54■□□□□ 0.72
PRPF40A-209ENST00000486100 COMMD8Q9NX08 183 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms