RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 CCDC94Q9BW85 323 aaPredicted RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 PANK2Q9BZ23 570 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 IL21RQ9HBE5 538 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 DUS2Q9NX74 493 aaKnown RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 APOBEC2Q9Y235 224 aaKnown RBP10.59□□□□□ -0.71
SND1-213ENST00000486037 TNFSF13BQ9Y275 285 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 BSNQ9UPA5 3926 aa10.59□□□□□ -0.71
SND1-213ENST00000486037 POLR2DO15514 142 aaKnown RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 TLX3O43711 291 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 DKK1O94907 266 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 HOXD12P35452 270 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 TIE1P35590 1138 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 AARSP49588 968 aaKnown RBP eCLIP10.58□□□□□ -0.72
SND1-213ENST00000486037 RPL6Q02878 288 aaKnown RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 ZNF33AQ06730 810 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 SRSF1Q07955 248 aaKnown RBP eCLIP10.58□□□□□ -0.721e-7■■□□□ 13.7
SND1-213ENST00000486037 USP4Q13107 963 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 SLC14A1Q13336 389 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 ZNF568Q3ZCX4 644 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 ZC2HC1CQ53FD0 456 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 CC2D1AQ6P1N0 951 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 RBM43Q6ZSC3 357 aaKnown RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 EFCAB13Q8IY85 973 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 IGSF22Q8N9C0 903 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 MCPH1Q8NEM0 835 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 ZBTB45Q96K62 511 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 TIGD1Q96MW7 591 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 GCNAQ96QF7 691 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 CYP2S1Q96SQ9 504 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 TNMDQ9H2S6 317 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 KIF9Q9HAQ2 790 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 CD93Q9NPY3 652 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 TOPORSQ9NS56 1045 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 BCCIPQ9P287 314 aaKnown RBP eCLIP10.58□□□□□ -0.72
SND1-213ENST00000486037 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
SND1-213ENST00000486037 COL5A1P20908 1838 aaPredicted RBP10.58□□□□□ -0.72
SND1-213ENST00000486037 ANK1P16157 1881 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 TCRBV21S2A2A0A5A6 115 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 GOLGA8CPA6NN73 597 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 ACTN4O43707 911 aaKnown RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 MED24O75448 989 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 ALDH1A2O94788 518 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 HARSP12081 509 aaKnown RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 SLC6A11P48066 632 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 CFHR1Q03591 330 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 MYBPC2Q14324 1141 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 E2F4Q16254 413 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 SLC39A12Q504Y0 691 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 SPDYCQ5MJ68 293 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 SDHAF4Q5VUM1 108 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 OVOS1Q6IE37 1185 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 KRBA2Q6ZNG9 492 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 PDILTQ8N807 584 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 BAHD1Q8TBE0 780 aaPredicted RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 LRRC15Q8TF66 581 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 ATP2A3Q93084 1043 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 DHX58Q96C10 678 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 AK8Q96MA6 479 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 FCRL3Q96P31 734 aaPredicted RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 ACAP3Q96P50 834 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 MMTAG2Q9BU76 263 aaKnown RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 TARS2Q9BW92 718 aaKnown RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 SEMA4CQ9C0C4 833 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 CCSER1Q9C0I3 900 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 TTC12Q9H892 705 aaPredicted RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 KIAA1522Q9P206 1035 aaPredicted RBP10.57□□□□□ -0.72
SND1-213ENST00000486037 DNMT3LQ9UJW3 386 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 COL6A6A6NMZ7 2263 aa10.57□□□□□ -0.72
SND1-213ENST00000486037 MYO18AQ92614 2054 aaKnown RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 AP5Z1O43299 807 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 LETM1O95202 739 aaPredicted RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 SYPP08247 313 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 PROZP22891 400 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 MAOBP27338 520 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 LRPAP1P30533 357 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 UBA7P41226 1012 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 DPP6P42658 865 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 IFNAR2P48551 515 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 CLDN6P56747 220 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 ZXDBP98169 803 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 GRIK2Q13002 908 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 DMP1Q13316 513 aaPredicted RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 PDIA5Q14554 519 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 ZNF268Q14587 947 aaPredicted RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 PLEKHG6Q3KR16 790 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 PADI6Q6TGC4 694 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 USP37Q86T82 979 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 LRRTM3Q86VH5 581 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 MON1AQ86VX9 555 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 C12orf40Q86WS4 652 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 GAS2L3Q86XJ1 694 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 SLFN12Q8IYM2 578 aa10.56□□□□□ -0.72
SND1-213ENST00000486037 LSM14AQ8ND56 463 aaKnown RBP10.56□□□□□ -0.72
SND1-213ENST00000486037 ERLEC1Q96DZ1 483 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms