RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 ITGBL1O95965 494 aaPredicted RBP23.54■■□□□ 1.36
CLN5-202ENST00000485938 WEE2P0C1S8 567 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 KRT3P12035 628 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 PTK7Q13308 1070 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 AGBL3Q8NEM8 1001 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 SLC7A3Q8WY07 619 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 ZNF333Q96JL9 665 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 CAMKK2Q96RR4 588 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 TJP2Q9UDY2 1190 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 COL11A1P12107 1806 aaPredicted RBP23.54■■□□□ 1.36
CLN5-202ENST00000485938 IQANK1A0A1B0GTG1 560 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 SLC18A2Q05940 514 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 GRM1Q13255 1194 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 HADHQ16836 314 aaKnown RBP23.54■■□□□ 1.36
CLN5-202ENST00000485938 SLC44A1Q8WWI5 657 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 FAM111AQ96PZ2 611 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 NMRK1Q9NWW6 199 aa23.54■■□□□ 1.36
CLN5-202ENST00000485938 NVLO15381 856 aaKnown RBP23.53■■□□□ 1.36
CLN5-202ENST00000485938 GYG2O15488 501 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 PDHA1P08559 390 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 ELK3P41970 407 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 KRT72Q14CN4 511 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 SGSM1Q2NKQ1 1148 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 EP400NLQ6ZTU2 488 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 FNIP1Q8TF40 1166 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 STK32BQ9NY57 414 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 CYTH4Q9UIA0 394 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 TCRBV9S1A1TA0A576 114 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 VHLP40337 213 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 EIF3EP60228 445 aaKnown RBP23.53■■□□□ 1.36
CLN5-202ENST00000485938 BASP1P80723 227 aaKnown RBP23.53■■□□□ 1.36
CLN5-202ENST00000485938 ZBTB16Q05516 673 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 FAAP100Q0VG06 881 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 CAPSQ13938 189 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 DPYSL3Q14195 570 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 RCN1Q15293 331 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 MUM1Q2TAK8 710 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 GNPTABQ3T906 1256 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 ACSBG2Q5FVE4 666 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 SCARA5Q6ZMJ2 495 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 CNTN3Q9P232 1028 aa23.53■■□□□ 1.36
CLN5-202ENST00000485938 APOC4-APOC2K7ER74 178 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 ADCY3O60266 1144 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 IL1BP01584 269 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 APOC2P02655 101 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 BGNP21810 368 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 ZNF200P98182 395 aaPredicted RBP23.52■■□□□ 1.36
CLN5-202ENST00000485938 KPNB1Q14974 876 aaKnown RBP23.52■■□□□ 1.36
CLN5-202ENST00000485938 RINLQ6ZS11 566 aa23.52■■□□□ 1.36
CLN5-202ENST00000485938 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.52■■□□□ 1.36
CLN5-202ENST00000485938 UPP2O95045 317 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 POLR2BP30876 1174 aaKnown RBP23.51■■□□□ 1.35
CLN5-202ENST00000485938 NRLP54845 237 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 SESN3P58005 492 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 YWHAEP62258 255 aaKnown RBP23.51■■□□□ 1.35
CLN5-202ENST00000485938 KBTBD12Q3ZCT8 623 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 ZPBP2Q6X784 338 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 ZBTB33Q86T24 672 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 RFX6Q8HWS3 928 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 TTC17Q96AE7 1141 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 NIFKQ9BYG3 293 aaKnown RBP23.51■■□□□ 1.35
CLN5-202ENST00000485938 TAS2R1Q9NYW7 299 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 IKBKGQ9Y6K9 419 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 KRT36O76013 467 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 PYGBP11216 843 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 PEX19P40855 299 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 ASPAP45381 313 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 KLC1Q07866 573 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 CCDC6Q16204 474 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 DUOXA2Q1HG44 320 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 RTKN2Q8IZC4 609 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 NRG4Q8WWG1 115 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 FAM136AQ96C01 138 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 YIPF3Q9GZM5 350 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 ZNF214Q9UL59 606 aaPredicted RBP23.51■■□□□ 1.35
CLN5-202ENST00000485938 TEX264Q9Y6I9 313 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 RLFQ13129 1914 aa23.51■■□□□ 1.35
CLN5-202ENST00000485938 C2orf71A6NGG8 1288 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 KBTBD13C9JR72 458 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 RBP3P10745 1247 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 TUBP50607 506 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 PSMC1P62191 440 aaKnown RBP23.5■■□□□ 1.35
CLN5-202ENST00000485938 SNX30Q5VWJ9 437 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 VPS52Q8N1B4 723 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 EMC1Q8N766 993 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 KCTD6Q8NC69 237 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 CMASQ8NFW8 434 aaPredicted RBP23.5■■□□□ 1.35
CLN5-202ENST00000485938 ZNF483Q8TF39 744 aaPredicted RBP23.5■■□□□ 1.35
CLN5-202ENST00000485938 MCUR1Q96AQ8 359 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 LHX5Q9H2C1 402 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 MMADHCQ9H3L0 296 aaPredicted RBP23.5■■□□□ 1.35
CLN5-202ENST00000485938 PCSK1NQ9UHG2 260 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 MCF2LO15068 1137 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 INHBAP08476 426 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 SERPINB4P48594 390 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 LBRQ14739 615 aaKnown RBP23.5■■□□□ 1.35
CLN5-202ENST00000485938 TAF5Q15542 800 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 FAM91A1Q658Y4 838 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 TTC7BQ86TV6 843 aa23.5■■□□□ 1.35
CLN5-202ENST00000485938 OXNAD1Q96HP4 312 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms