RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 PCDHA7Q9UN72 937 aa14.67□□□□□ -0.06
SCAF4-206ENST00000485790 PTPRJQ12913 1337 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 OTOGLQ3ZCN5 2332 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 COL4A3Q01955 1670 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 MED19A0JLT2 244 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 C2orf78A6NCI8 922 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 ZNF840PA6NDX5 716 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 AXIN1O15169 862 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 HCRTO43612 131 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 RNF40O75150 1001 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 STAU1O95793 577 aaKnown RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 EGFP01133 1207 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 P4HA1P13674 534 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 TCF3P15923 654 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 SRSF5Q13243 272 aaKnown RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 BIRC3Q13489 604 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 ZNF77Q15935 545 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 MDH1BQ5I0G3 518 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 SYT13Q7L8C5 426 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 C12orf56Q8IXR9 622 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 FAM160A2Q8N612 972 aaPredicted RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 ACDQ96AP0 544 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 TNIP3Q96KP6 325 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 SLC22A12Q96S37 553 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 MRPL45Q9BRJ2 306 aaKnown RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 LINC00597Q9H2U6 94 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 FBRSL1Q9HCM7 1045 aaKnown RBP14.66□□□□□ -0.06
SCAF4-206ENST00000485790 PARD6AQ9NPB6 346 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 RCOR1Q9UKL0 485 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 WNT6Q9Y6F9 365 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 ATP8B3O60423 1300 aa14.66□□□□□ -0.06
SCAF4-206ENST00000485790 MYH11P35749 1972 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 DCDC2BA2VCK2 349 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 F8VP50 259 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 RHOBTB1O94844 696 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 RTN3O95197 1032 aaPredicted RBP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 KIF20AO95235 890 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 F13A1P00488 732 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 YWHAQP27348 245 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 PXNP49023 591 aaPredicted RBP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 MYL6P60660 151 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 BMT2Q1RMZ1 405 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 SGSM1Q2NKQ1 1148 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 EML3Q32P44 896 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 RESP18Q5W5W9 173 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 DDX42Q86XP3 938 aaKnown RBP eCLIP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 ADGRG2Q8IZP9 1017 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 NUP93Q8N1F7 819 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 C12orf50Q8NA57 414 aaPredicted RBP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 CCDC47Q96A33 483 aaKnown RBP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 CHFRQ96EP1 664 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 TTLL2Q9BWV7 592 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 DNAI2Q9GZS0 605 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 C2orf42Q9NWW7 574 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 USP25Q9UHP3 1055 aa14.65□□□□□ -0.06
SCAF4-206ENST00000485790 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.65□□□□□ -0.06
SCAF4-206ENST00000485790 DMXL1Q9Y485 3027 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 LEFTY2O00292 366 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 SLC30A4O14863 429 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 TADA3O75528 432 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 APBB3O95704 486 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 RPN1P04843 607 aaKnown RBP14.64□□□□□ -0.07
SCAF4-206ENST00000485790 MYL1P05976 194 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 SLC7A9P82251 487 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 EHHADHQ08426 723 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 TAF10Q12962 218 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 CUL4BQ13620 913 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 ELF2Q15723 593 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 ZNF667Q5HYK9 610 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 PRR23CQ6ZRP0 262 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 B3GALNT2Q8NCR0 500 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 ZNF516Q92618 1163 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 ZC3H10Q96K80 434 aaKnown RBP14.64□□□□□ -0.07
SCAF4-206ENST00000485790 MED10Q9BTT4 135 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 EXOC1Q9NV70 894 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 COMMD8Q9NX08 183 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 TBC1D14Q9P2M4 693 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 EBF1Q9UH73 591 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 PCDHGA5Q9Y5G8 931 aa14.64□□□□□ -0.07
SCAF4-206ENST00000485790 CACNA1AO00555 2505 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 ZNF806P0C7X5 589 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 USP46P62068 366 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 USP4Q13107 963 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 NCOA4Q13772 614 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 CCDC142Q17RM4 750 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 ZNF699Q32M78 642 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 PREPLQ4J6C6 727 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-206ENST00000485790 AASDHQ4L235 1098 aaPredicted RBP14.63□□□□□ -0.07
SCAF4-206ENST00000485790 USP39Q53GS9 565 aaKnown RBP14.63□□□□□ -0.07
SCAF4-206ENST00000485790 IL31Q6EBC2 164 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 NUDT18Q6ZVK8 323 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 C11orf74Q86VG3 221 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 RPLP0P6Q8NHW5 317 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 OVCA2Q8WZ82 227 aa14.63□□□□□ -0.07
SCAF4-206ENST00000485790 B3GNT5Q9BYG0 378 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms