RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 PKN3Q6P5Z2 889 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 CEP68Q76N32 757 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.3■□□□□ 0.52
SMC4-216ENST00000485645 WDR5BQ86VZ2 330 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 CEP57L1Q8IYX8 460 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 SH3RF2Q8TEC5 729 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 ZNF516Q92618 1163 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 ATP2A3Q93084 1043 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 P2RY13Q9BPV8 354 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 TRPM5Q9NZQ8 1165 aa18.3■□□□□ 0.52
SMC4-216ENST00000485645 CDV3Q9UKY7 258 aaKnown RBP18.3■□□□□ 0.52
SMC4-216ENST00000485645 LRP3O75074 770 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 PHACTR2O75167 634 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 STAU1O95793 577 aaKnown RBP18.29■□□□□ 0.52
SMC4-216ENST00000485645 PFKLP17858 780 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 PTPN1P18031 435 aaKnown RBP18.29■□□□□ 0.52
SMC4-216ENST00000485645 ATICP31939 592 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 NR1H3Q13133 447 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 GOLGA5Q8TBA6 731 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 SYAP1Q96A49 352 aaPredicted RBP18.29■□□□□ 0.52
SMC4-216ENST00000485645 TTLL2Q9BWV7 592 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 FBRSL1Q9HCM7 1045 aaKnown RBP18.29■□□□□ 0.52
SMC4-216ENST00000485645 NXF1Q9UBU9 619 aaKnown RBP18.29■□□□□ 0.52
SMC4-216ENST00000485645 SERTAD1Q9UHV2 236 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 ARHGAP26Q9UNA1 814 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 SLC8A2Q9UPR5 921 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 NME7Q9Y5B8 376 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 WNT6Q9Y6F9 365 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 PTPRDP23468 1912 aa18.29■□□□□ 0.52
SMC4-216ENST00000485645 MED19A0JLT2 244 aaPredicted RBP18.28■□□□□ 0.52
SMC4-216ENST00000485645 A8MXQ7 604 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 F8VP50 259 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 RNF40O75150 1001 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 TCF3P15923 654 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 HOXC13P31276 330 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 PPP3CCP48454 512 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 ATXN1P54253 815 aaKnown RBP18.28■□□□□ 0.52
SMC4-216ENST00000485645 MYL6P60660 151 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 USP46P62068 366 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 DNM1Q05193 864 aaKnown RBP18.28■□□□□ 0.52
SMC4-216ENST00000485645 EML3Q32P44 896 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 FBXO43Q4G163 708 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 GRAMD1CQ8IYS0 662 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 SPRYD3Q8NCJ5 442 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 CD101Q93033 1021 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 C8orf48Q96LL4 319 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 GZF1Q9H116 711 aaPredicted RBP18.28■□□□□ 0.52
SMC4-216ENST00000485645 RCOR1Q9UKL0 485 aa18.28■□□□□ 0.52
SMC4-216ENST00000485645 CCDC163A0A0D9SF12 145 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 SLFN14P0C7P3 912 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 NOP14P78316 857 aaKnown RBP18.27■□□□□ 0.52
SMC4-216ENST00000485645 PKP1Q13835 747 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 NAIF1Q69YI7 327 aaPredicted RBP18.27■□□□□ 0.52
SMC4-216ENST00000485645 ELOVL4Q9GZR5 314 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 XYLT2Q9H1B5 865 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 LINC00597Q9H2U6 94 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 DPEP3Q9H4B8 488 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 SEMA4GQ9NTN9 838 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 EXOC1Q9NV70 894 aa18.27■□□□□ 0.52
SMC4-216ENST00000485645 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.27■□□□□ 0.52
SMC4-216ENST00000485645 RALGAPA1Q6GYQ0 2036 aa18.27■□□□□ 0.51
SMC4-216ENST00000485645 KLRC4O43908 158 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 CLSTN1O94985 981 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 NFATC1O95644 943 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 PXNP49023 591 aaPredicted RBP18.26■□□□□ 0.51
SMC4-216ENST00000485645 CASP4P49662 377 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 AP3M2P53677 418 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 PSMD2Q13200 908 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 BIRC3Q13489 604 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 TDRD10Q5VZ19 366 aaKnown RBP18.26■□□□□ 0.51
SMC4-216ENST00000485645 CAMKK1Q8N5S9 505 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 FAM160A2Q8N612 972 aaPredicted RBP18.26■□□□□ 0.51
SMC4-216ENST00000485645 B3GALNT2Q8NCR0 500 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 PARD3BQ8TEW8 1205 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 PAGE5Q96GU1 130 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 RTKNQ9BST9 563 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 ZNF518BQ9C0D4 1074 aa18.26■□□□□ 0.51
SMC4-216ENST00000485645 SDK1Q7Z5N4 2213 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 ZNF840PA6NDX5 716 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 LRRIQ3A6PVS8 624 aaPredicted RBP18.25■□□□□ 0.51
SMC4-216ENST00000485645 LEFTY2O00292 366 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 ACTN4O43707 911 aaKnown RBP18.25■□□□□ 0.51
SMC4-216ENST00000485645 RPP40O75818 363 aaKnown RBP18.25■□□□□ 0.51
SMC4-216ENST00000485645 ABL1P00519 1130 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 TAF10Q12962 218 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 STK4Q13043 487 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 CSRP2Q16527 193 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 ZNF699Q32M78 642 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 RPLP0P6Q8NHW5 317 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 PLEKHO2Q8TD55 490 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 GAB3Q8WWW8 586 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 SLITRK1Q96PX8 696 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 B3GNT5Q9BYG0 378 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 RNF38Q9H0F5 515 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 VRTNQ9H8Y1 702 aa18.25■□□□□ 0.51
SMC4-216ENST00000485645 HELZP42694 1942 aaKnown RBP18.24■□□□□ 0.51
SMC4-216ENST00000485645 CLDN5O00501 218 aa18.24■□□□□ 0.51
SMC4-216ENST00000485645 FOXD2O60548 495 aaPredicted RBP18.24■□□□□ 0.51
SMC4-216ENST00000485645 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
SMC4-216ENST00000485645 CACNA2D1P54289 1103 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms