RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SH3RF2Q8TEC5 729 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 SYAP1Q96A49 352 aaPredicted RBP27.41■■□□□ 1.98
HLA-F-227ENST00000485513 PAGE5Q96GU1 130 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 ECT2Q9H8V3 914 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 EXOC1Q9NV70 894 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 TRPM5Q9NZQ8 1165 aa27.41■■□□□ 1.98
HLA-F-227ENST00000485513 NXF1Q9UBU9 619 aaKnown RBP27.41■■□□□ 1.98
HLA-F-227ENST00000485513 HELZP42694 1942 aaKnown RBP27.4■■□□□ 1.98
HLA-F-227ENST00000485513 F8VP50 259 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 TGM1P22735 817 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 GJA4P35212 333 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 CASP4P49662 377 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 USP46P62068 366 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 SRSF5Q13243 272 aaKnown RBP27.4■■□□□ 1.98
HLA-F-227ENST00000485513 PKN3Q6P5Z2 889 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 ATP2A3Q93084 1043 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 EXOC4Q96A65 974 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 C8orf48Q96LL4 319 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 TTLL2Q9BWV7 592 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 XYLT2Q9H1B5 865 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 DPEP3Q9H4B8 488 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 ARHGAP26Q9UNA1 814 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 WNT6Q9Y6F9 365 aa27.4■■□□□ 1.98
HLA-F-227ENST00000485513 A8MXQ7 604 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 ATG13O75143 517 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 EGFP01133 1207 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 GALK1P51570 392 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 NOP14P78316 857 aaKnown RBP27.39■■□□□ 1.98
HLA-F-227ENST00000485513 LMNB2Q03252 620 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 STK4Q13043 487 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 BIRC3Q13489 604 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 WDR5BQ86VZ2 330 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 KIAA0895Q8NCT3 520 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 PLEKHO2Q8TD55 490 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 P2RY13Q9BPV8 354 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 FBRSL1Q9HCM7 1045 aaKnown RBP27.39■■□□□ 1.98
HLA-F-227ENST00000485513 PARD6AQ9NPB6 346 aa27.39■■□□□ 1.98
HLA-F-227ENST00000485513 RETP07949 1114 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 TCF3P15923 654 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 PFKLP17858 780 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 DRD1P21728 446 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 HOXC13P31276 330 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 AP3M2P53677 418 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 PSMD2Q13200 908 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 EML3Q32P44 896 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 KMT5BQ4FZB7 885 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 TDRD10Q5VZ19 366 aaKnown RBP27.38■■□□□ 1.97
HLA-F-227ENST00000485513 B3GALNT2Q8NCR0 500 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 PARD3BQ8TEW8 1205 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 ELOVL4Q9GZR5 314 aa27.38■■□□□ 1.97
HLA-F-227ENST00000485513 A0A1B0GVL5 298 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 LRRIQ3A6PVS8 624 aaPredicted RBP27.37■■□□□ 1.97
HLA-F-227ENST00000485513 PRR5-ARHGAP8B1AHC4 643 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 RNF40O75150 1001 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 CLSTN1O94985 981 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 PFKFB1P16118 471 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 SDHBP21912 280 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 CMA1P23946 247 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 PPP3CCP48454 512 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 ARHGAP8P85298 464 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 SPEM2Q0P670 501 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 ZNF699Q32M78 642 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 NAIF1Q69YI7 327 aaPredicted RBP27.37■■□□□ 1.97
HLA-F-227ENST00000485513 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.37■■□□□ 1.97
HLA-F-227ENST00000485513 ZNF518BQ9C0D4 1074 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 VRTNQ9H8Y1 702 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 DMAC2Q9NW81 257 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 USP25Q9UHP3 1055 aa27.37■■□□□ 1.97
HLA-F-227ENST00000485513 CACNA2D1P54289 1103 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 CLDN10P78369 228 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 NR1H3Q13133 447 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 CEP68Q76N32 757 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 SLC9A9Q8IVB4 645 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 B3GNT5Q9BYG0 378 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 SMYD3Q9H7B4 428 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 TMEM30AQ9NV96 361 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 SLC8A2Q9UPR5 921 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 DNAH14Q0VDD8 3507 aa27.36■■□□□ 1.97
HLA-F-227ENST00000485513 ZNF840PA6NDX5 716 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 CLDN5O00501 218 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 LRP3O75074 770 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 NCOA4Q13772 614 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 FBXO43Q4G163 708 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 ZNF667Q5HYK9 610 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 TMEM174Q8WUU8 243 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 CD101Q93033 1021 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 SPATA32Q96LK8 384 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 LINC00597Q9H2U6 94 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 KCTD10Q9H3F6 313 aa27.35■■□□□ 1.97
HLA-F-227ENST00000485513 ABL1P00519 1130 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 C4BPAP04003 597 aaKnown RBP27.34■■□□□ 1.97
HLA-F-227ENST00000485513 MYL1P05976 194 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 PXNP49023 591 aaPredicted RBP27.34■■□□□ 1.97
HLA-F-227ENST00000485513 CDH8P55286 799 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 ZXDBP98169 803 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 TAF10Q12962 218 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 SLITRK1Q96PX8 696 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 CDV3Q9UKY7 258 aaKnown RBP27.34■■□□□ 1.97
HLA-F-227ENST00000485513 HPSEQ9Y251 543 aa27.34■■□□□ 1.97
HLA-F-227ENST00000485513 RALGAPA1Q6GYQ0 2036 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms