RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 CSNK1G1Q9HCP0 422 aa21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 DMAP1Q9NPF5 467 aaPredicted RBP21.57■■□□□ 1.04
VCPKMT-203ENST00000484763 PATJQ8NI35 1801 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 PLXNA4Q9HCM2 1894 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 TCRBV5S1A1TA0A578 114 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 GRID2IPA4D2P6 1211 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 PALMO75781 387 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 SMARCB1Q12824 385 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 GPR17Q13304 367 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 SLC8B1Q6J4K2 584 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 RSPO2Q6UXX9 243 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 VPS52Q8N1B4 723 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 FBXO22Q8NEZ5 403 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 KCTD13Q8WZ19 329 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 ABI2Q9NYB9 513 aaPredicted RBP21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 PCDHB5Q9Y5E4 795 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 CDY1Q9Y6F8 540 aa21.56■■□□□ 1.04
VCPKMT-203ENST00000484763 LINC01553A4QN01 128 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 PIK3R2O00459 728 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 C2CD2LO14523 706 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 CTNNB1P35222 781 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 CACNA2D1P54289 1103 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ARPP19P56211 112 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 TAP1Q03518 808 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ZDHHC17Q8IUH5 632 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 SYCE1Q8N0S2 351 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 KLHL23Q8NBE8 558 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ZMIZ2Q8NF64 920 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ZNF592Q92610 1267 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 MCRS1Q96EZ8 462 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 SELENOOQ9BVL4 669 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 UBXN6Q9BZV1 441 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 UBE2OQ9C0C9 1292 aaKnown RBP21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 TMEM30AQ9NV96 361 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ANAPC7Q9UJX3 599 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 GOLGA8SH3BPF8 625 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 BUB1BO60566 1050 aaPredicted RBP21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 CASQ1P31415 396 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 BMPR1AP36894 532 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 PPP1R15BQ5SWA1 713 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 OR6B2Q6IFH4 312 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 FAM183BPQ6ZVS7 135 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 GPR65Q8IYL9 337 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 LRRC57Q8N9N7 239 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 KCNK16Q96T55 309 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 PLVAPQ9BX97 442 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 ABCB6Q9NP58 842 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 PNPLA8Q9NP80 782 aa21.55■■□□□ 1.04
VCPKMT-203ENST00000484763 FANCGO15287 622 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 GABBR2O75899 941 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 FAM109BQ6ICB4 259 aaPredicted RBP21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 C11orf63Q6NUN7 778 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 DAAM2Q86T65 1068 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 KIF18AQ8NI77 898 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 FEZF2Q8TBJ5 459 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 C2orf15Q8WU43 125 aaKnown RBP21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 PGLYRP2Q96PD5 576 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 GDF15Q99988 308 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 LRRC4Q9HBW1 653 aa21.54■■□□□ 1.04
VCPKMT-203ENST00000484763 MTMR11A4FU01 709 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 GRXCR1A8MXD5 290 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 PAPSS1O43252 624 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 LCP1P13796 627 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 CYP2F1P24903 491 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 ROR1Q01973 937 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 ADIGQ0VDE8 80 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 FAM102AQ5T9C2 384 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 DCUN1D2Q6PH85 259 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 OLFML1Q6UWY5 402 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 VSTM1Q6UX27 236 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 SPPL2BQ8TCT7 592 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 MCEEQ96PE7 176 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 NAPGQ99747 312 aaPredicted RBP21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 ZBP1Q9H171 429 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 MRPL17Q9NRX2 175 aaKnown RBP21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 JRKLQ9Y4A0 524 aa21.53■■□□□ 1.04
VCPKMT-203ENST00000484763 CTAGE9A4FU28 777 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SIGLEC16A6NMB1 481 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 GJB6O95452 261 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 KRT3P12035 628 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 RPL17P18621 184 aaKnown RBP21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 OR1D2P34982 312 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 MAGEA11P43364 429 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 CREMQ03060 361 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SLFN11Q7Z7L1 901 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SIX6OS1Q8N1H7 587 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 CLSTN3Q9BQT9 956 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 METTL5Q9NRN9 209 aaKnown RBP21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 LCMT1Q9UIC8 334 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 LZTS1Q9Y250 596 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 SSX2IPQ9Y2D8 614 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 LAMA2P24043 3122 aaKnown RBP21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 WDR27A2RRH5 827 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 HHLA1C9JL84 531 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 F8VP50 259 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 MYO1FO00160 1098 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 ADAM12O43184 909 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 CTSAP10619 480 aa21.52■■□□□ 1.04
VCPKMT-203ENST00000484763 MYOGP15173 224 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms