RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 ITGAMP11215 1152 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 IL1R1P14778 569 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 FGFR2P21802 821 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 ACVR2AP27037 513 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 ZNF134P52741 427 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 SCAPQ12770 1279 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 RBM20Q5T481 1227 aaKnown RBP7.93□□□□□ -1.14
UBR3-210ENST00000484596 PTCD3Q96EY7 689 aaKnown RBP7.93□□□□□ -1.14
UBR3-210ENST00000484596 FAM83DQ9H4H8 585 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 MID2Q9UJV3 735 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 CEP83Q9Y592 693 aa7.93□□□□□ -1.14
UBR3-210ENST00000484596 NCK2O43639 380 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 BTF3P20290 206 aaKnown RBP7.92□□□□□ -1.14
UBR3-210ENST00000484596 GATA3P23771 443 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 CLK3P49761 638 aaKnown RBP7.92□□□□□ -1.14
UBR3-210ENST00000484596 CPT1AP50416 773 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 DGKEP52429 567 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 ZDHHC24Q6UX98 284 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 GPR149Q86SP6 731 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 ENAHQ8N8S7 591 aaPredicted RBP7.92□□□□□ -1.14
UBR3-210ENST00000484596 FANCBQ8NB91 859 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 PTPRHQ9HD43 1115 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 PLCB1Q9NQ66 1216 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 FNIP2Q9P278 1114 aa7.92□□□□□ -1.14
UBR3-210ENST00000484596 TESQ9UGI8 421 aaKnown RBP7.92□□□□□ -1.14
UBR3-210ENST00000484596 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.92□□□□□ -1.14
UBR3-210ENST00000484596 AQP7P3A6NL99 342 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 EIF5BO60841 1220 aaKnown RBP7.91□□□□□ -1.14
UBR3-210ENST00000484596 TYRP1P17643 537 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 TPH1P17752 444 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 ITIH3Q06033 890 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 MYO1EQ12965 1108 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 KLHDC7AQ5VTJ3 777 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 PRIMA1Q86XR5 153 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 TXLNBQ8N3L3 684 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 LNX2Q8N448 690 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 FAM109AQ8N4B1 249 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 B3GALNT2Q8NCR0 500 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 CCDC150Q8NCX0 1101 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 VPS37AQ8NEZ2 397 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 FAM136AQ96C01 138 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 TPSD1Q9BZJ3 242 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 NDRG4Q9ULP0 352 aaKnown RBP7.91□□□□□ -1.14
UBR3-210ENST00000484596 CAPN11Q9UMQ6 739 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 LRCH1Q9Y2L9 728 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 BICRAQ9NZM4 1560 aa7.91□□□□□ -1.14
UBR3-210ENST00000484596 ABHD14A-ACY1A0A1B0GW23 586 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 RAB27BO00194 218 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 ESRRBO95718 433 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 MYL4P12829 197 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 PLA2G5P39877 138 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 MPLP40238 635 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 PRKAG1P54619 331 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 NXPH1P58417 271 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 FAM83BQ5T0W9 1011 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 ARHGAP40Q5TG30 622 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 STRIP1Q5VSL9 837 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 XRRA1Q6P2D8 792 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 C1orf228Q6PIY5 440 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 USP17L6PQ6QN14 398 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 KRT28Q7Z3Y7 464 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 ZNF280BQ86YH2 543 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 MYLK4Q86YV6 388 aaPredicted RBP7.9□□□□□ -1.14
UBR3-210ENST00000484596 SLC15A3Q8IY34 581 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 VGLL2Q8N8G2 317 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 BPIFB1Q8TDL5 484 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 AMBRA1Q9C0C7 1298 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 PPCSQ9HAB8 311 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 TBC1D23Q9NUY8 699 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 CDY1Q9Y6F8 540 aa7.9□□□□□ -1.14
UBR3-210ENST00000484596 HNRNPDLO14979 420 aaKnown RBP7.89□□□□□ -1.15
UBR3-210ENST00000484596 A1BGP04217 495 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 IDEP14735 1019 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 KCNA3P22001 575 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 PMS2P11Q13670 270 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 NPY5RQ15761 445 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 HSP90AB4PQ58FF6 505 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 MZT2AQ6P582 158 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 SPARTQ8N0X7 666 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 SLC44A3Q8N4M1 653 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBR3-210ENST00000484596 SSH3Q8TE77 659 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 PPP2R3CQ969Q6 453 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 ZNF566Q969W8 418 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 PGBD1Q96JS3 809 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 Q96MF0 132 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 MAGEB5Q9BZ81 275 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 ZCWPW1Q9H0M4 648 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 CASS4Q9NQ75 786 aa7.89□□□□□ -1.15
UBR3-210ENST00000484596 HEYLQ9NQ87 328 aaPredicted RBP7.89□□□□□ -1.15
UBR3-210ENST00000484596 TRMT13Q9NUP7 481 aaKnown RBP7.89□□□□□ -1.15
UBR3-210ENST00000484596 MAST3O60307 1309 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 H7C4K7 107 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 PROM1O43490 865 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 TCEA3O75764 348 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 HARSP12081 509 aaKnown RBP7.88□□□□□ -1.15
UBR3-210ENST00000484596 PTDSS1P48651 473 aaKnown RBP7.88□□□□□ -1.15
UBR3-210ENST00000484596 MAPK10P53779 464 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 MPP3Q13368 585 aa7.88□□□□□ -1.15
UBR3-210ENST00000484596 PRR16Q569H4 304 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms