RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 CLEC16AQ2KHT3 1053 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 LIN9Q5TKA1 542 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 SDHAF4Q5VUM1 108 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 NAA35Q5VZE5 725 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 Q7L0L9 218 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 WDTC1Q8N5D0 677 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 C1orf131Q8NDD1 294 aaKnown RBP12.93□□□□□ -0.34
SDC1-206ENST00000482879 ZMIZ2Q8NF64 920 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 SLC30A5Q8TAD4 765 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 SLC7A14Q8TBB6 771 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 HDAC7Q8WUI4 952 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 SLC35F5Q8WV83 523 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 CPA5Q8WXQ8 436 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 UBXN6Q9BZV1 441 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 MAN1C1Q9NR34 630 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 ADAMTS1Q9UHI8 967 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 DPP7Q9UHL4 492 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 HCFC2Q9Y5Z7 792 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 BRWD1Q9NSI6 2320 aa12.93□□□□□ -0.34
SDC1-206ENST00000482879 PATJQ8NI35 1801 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 A0A087X0T9 212 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 SOWAHDA6NJG2 315 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 SPDYE4A6NLX3 237 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 C8AP07357 584 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 FAM228BP0C875 321 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 CDH5P33151 784 aaPredicted RBP12.92□□□□□ -0.34
SDC1-206ENST00000482879 RGS7P49802 495 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 EPHB3P54753 998 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 NOMO3P69849 1222 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 TWF1Q12792 350 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 HYAL1Q12794 435 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 ASTE1Q2TB18 679 aaPredicted RBP12.92□□□□□ -0.34
SDC1-206ENST00000482879 PPM1LQ5SGD2 360 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 ACAD10Q6JQN1 1059 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 PMF1Q6P1K2 205 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 RTL10Q7L3V2 364 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 PIGZQ86VD9 579 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 TMEM139Q8IV31 216 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 CCDC170Q8IYT3 715 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 DEFB123Q8N688 67 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 EFHBQ8N7U6 833 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 CCDC112Q8NEF3 446 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 GPR152Q8TDT2 470 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 GIPC2Q8TF65 315 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 NOX5Q96PH1 765 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 ST7Q9NRC1 585 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 CYTH4Q9UIA0 394 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 INSL5Q9Y5Q6 135 aa12.92□□□□□ -0.34
SDC1-206ENST00000482879 HHLA1C9JL84 531 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 NRDCO43847 1150 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 ZMYND10O75800 440 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 LRG1P02750 347 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 GZMAP12544 262 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 UNGP13051 313 aaPredicted RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 ATF6P18850 670 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 CYLC1P35663 651 aaPredicted RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 NSFP46459 744 aaKnown RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 PLA2G4AP47712 749 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 KIF11P52732 1056 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 RBM10P98175 930 aaKnown RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 PDCLQ13371 301 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 PLD1Q13393 1074 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 SLC18A3Q16572 532 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 CCDC122Q5T0U0 273 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 ALKBH5Q6P6C2 394 aaKnown RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 ERICH1Q86X53 443 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 VN1R2Q8NFZ6 395 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 STK32AQ8WU08 396 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 MYLIPQ8WY64 445 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 KCTD13Q8WZ19 329 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 CASP10Q92851 521 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 PPP1R13BQ96KQ4 1090 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 SPATA17Q96L03 361 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 CDX2Q99626 313 aaPredicted RBP12.91□□□□□ -0.34
SDC1-206ENST00000482879 SLC4A5Q9BY07 1137 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 LRRC4Q9HBW1 653 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 SPTLC3Q9NUV7 552 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 TAS2R14Q9NYV8 317 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 MYO16Q9Y6X6 1858 aa12.91□□□□□ -0.34
SDC1-206ENST00000482879 SLC38A8A6NNN8 435 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 PIK3R2O00459 728 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 RTN2O75298 545 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 RFPL2O75678 378 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
SDC1-206ENST00000482879 LCP1P13796 627 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 ACADSBP45954 432 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 SNX16P57768 344 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 CENPCQ03188 943 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 IFRD2Q12894 506 aaPredicted RBP12.9□□□□□ -0.34
SDC1-206ENST00000482879 KCNC3Q14003 757 aa12.9□□□□□ -0.34
SDC1-206ENST00000482879 MTF1Q14872 753 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms