RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 USP46P62068 366 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 SWSAP1Q6NVH7 229 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 EEPD1Q7L9B9 569 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 ALYREFQ86V81 257 aaKnown RBP14.95□□□□□ -0.02
COL9A2-207ENST00000482722 NCAPG2Q86XI2 1143 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 ST13P4Q8IZP2 240 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-207ENST00000482722 ARHGAP24Q8N264 748 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
COL9A2-207ENST00000482722 NAT14Q8WUY8 206 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 OXNAD1Q96HP4 312 aaPredicted RBP14.95□□□□□ -0.02
COL9A2-207ENST00000482722 PDCD2LQ9BRP1 358 aa14.95□□□□□ -0.02
COL9A2-207ENST00000482722 F8W8V4 182 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 PROSCO94903 275 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 MYL2P10916 166 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 HARSP12081 509 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 GRIA2P42262 883 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 GPX6P59796 221 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 RASA2Q15283 850 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 MDH1BQ5I0G3 518 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 TREML2Q5T2D2 321 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 MYLK4Q86YV6 388 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 RHOT1Q8IXI2 618 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 CCDC110Q8TBZ0 833 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 LPAR1Q92633 364 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 PPP2R3CQ969Q6 453 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 KLRG1Q96E93 195 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 HIC2Q96JB3 615 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 OLFM3Q96PB7 478 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 TMEM121Q9BTD3 319 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 VPS11Q9H270 941 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SSU72Q9NP77 194 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SAE1Q9UBE0 346 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 BRCA1P38398 1863 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 COL11A1P12107 1806 aaPredicted RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 ALOX15BO15296 676 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 MAGEC1O60732 1142 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 OPHN1O60890 802 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 ENO1P06733 434 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 RPS12P25398 132 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 GEMIN4P57678 1058 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 CNTN2Q02246 1040 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 TFDP1Q14186 410 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 EFHC2Q5JST6 749 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SCARA3Q6AZY7 606 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 RAPH1Q70E73 1250 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SPATA24Q86W54 205 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 TREML1Q86YW5 311 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SCUBE1Q8IWY4 988 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 GPD1LQ8N335 351 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 SLC25A41Q8N5S1 370 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 RBM15BQ8NDT2 890 aaKnown RBP14.94□□□□□ -0.02
COL9A2-207ENST00000482722 IL1RAPL1Q9NZN1 696 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 MYPNQ86TC9 1320 aa14.94□□□□□ -0.02
COL9A2-207ENST00000482722 FAM237BA0A1B0GVD1 139 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 ZNF862O60290 1169 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 JAK3P52333 1124 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 NET1Q7Z628 596 aaPredicted RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 RBM12BQ8IXT5 1001 aaKnown RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 STKLD1Q8NE28 680 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 CLMNQ96JQ2 1002 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 PXMP2Q9NR77 195 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 HNRNPRO43390 633 aaKnown RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 PLA2G6O60733 806 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 PABPC4LP0CB38 370 aaKnown RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 WNT7BP56706 349 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 RPL7AP62424 266 aaKnown RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 AP2B1P63010 937 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 NFX1Q12986 1120 aaKnown RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 MTERF2Q49AM1 385 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 SEZ6Q53EL9 994 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 DPY19L2Q6NUT2 758 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 MFSD7Q6UXD7 560 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 USP37Q86T82 979 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 BANPQ8N9N5 519 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 ZNF526Q8TF50 670 aaPredicted RBP14.93□□□□□ -0.02
COL9A2-207ENST00000482722 ZNF516Q92618 1163 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 ST6GALNAC4Q9H4F1 302 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 RABGEF1Q9UJ41 708 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 COQ4Q9Y3A0 265 aa14.93□□□□□ -0.02
COL9A2-207ENST00000482722 KIAA1217Q5T5P2 1943 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 CLUHO75153 1309 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 TLR3O15455 904 aaKnown RBP14.92□□□□□ -0.02
COL9A2-207ENST00000482722 LIASO43766 372 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 CIB2O75838 187 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 OR6B1O95007 311 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 LYPLA2O95372 231 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 FAM200BP0CF97 657 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 VAV1P15498 845 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 BGNP21810 368 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 LIG4P49917 911 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 ACTR3P61158 418 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 KRT76Q01546 638 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 SYCP2LQ5T4T6 812 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 TMEM270Q6UE05 265 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 NIPA1Q7RTP0 329 aa14.92□□□□□ -0.02
COL9A2-207ENST00000482722 TMPRSS6Q8IU80 811 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms