RNA–Protein interactions for RNA: ENST00000480760.1

CTSS-204, Transcript of cathepsin S, humanhuman

TSL 3

Gene CTSS, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-204ENST00000480760 CLUL1Q15846 466 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
CTSS-204ENST00000480760 DUSP28Q4G0W2 176 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 ZNF385BQ569K4 471 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 ERICH6BQ5W0A0 696 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 KCNV1Q6PIU1 500 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 SEPT14Q6ZU15 432 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 STOX1Q6ZVD7 989 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 CXXC5Q7LFL8 322 aaKnown RBP5.89□□□□□ -1.47
CTSS-204ENST00000480760 TMEM199Q8N511 208 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 STPG3Q8N7X2 389 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 KLHDC9Q8NEP7 349 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 MORC4Q8TE76 937 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 PIBF1Q8WXW3 757 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 TOX2Q96NM4 488 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 PIGSQ96S52 555 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 GDF15Q99988 308 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 QRSL1Q9H0R6 528 aaKnown RBP5.89□□□□□ -1.47
CTSS-204ENST00000480760 OR10A5Q9H207 317 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 MTIF3Q9H2K0 278 aaKnown RBP5.89□□□□□ -1.47
CTSS-204ENST00000480760 LUC7LQ9NQ29 371 aaKnown RBP5.89□□□□□ -1.47
CTSS-204ENST00000480760 KCND1Q9NSA2 647 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 RBM28Q9NW13 759 aaKnown RBP5.89□□□□□ -1.47
CTSS-204ENST00000480760 ZIM2Q9NZV7 527 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 MAD2L2Q9UI95 211 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 MYH8P13535 1937 aa5.89□□□□□ -1.47
CTSS-204ENST00000480760 PLXNB2O15031 1838 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 CCDC196A0A1B0GTZ2 297 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 MYADML2A6NDP7 307 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 RFXAPO00287 272 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 ZBTB43O43298 467 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 XPOTO43592 962 aaKnown RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 EIF3JO75822 258 aaKnown RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 TSPAN15O95858 294 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 MYCLP12524 364 aaPredicted RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 CASTP20810 708 aaKnown RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 CCND2P30279 289 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 RECQLP46063 649 aaPredicted RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 FXR1P51114 621 aaKnown RBP eCLIP5.88□□□□□ -1.47
CTSS-204ENST00000480760 ANTXR2P58335 489 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 IL13RA1P78552 427 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 AKAP17AQ02040 695 aaKnown RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 FPGSQ05932 587 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 TROAPQ12815 778 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 ITGA7Q13683 1181 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 NOLC1Q14978 699 aaKnown RBP eCLIP5.88□□□□□ -1.47
CTSS-204ENST00000480760 NECTIN1Q15223 517 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 TAPT1Q6NXT6 567 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 BLOC1S2Q6QNY1 142 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 CXCL17Q6UXB2 119 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 UNQ6494/PRO21346Q6UXR6 183 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 ANKRD33Q7Z3H0 272 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 MICU3Q86XE3 530 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 BADQ92934 168 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 RAX2Q96IS3 184 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 TAAR1Q96RJ0 339 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 MTG1Q9BT17 334 aaPredicted RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 KATNAL1Q9BW62 490 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 SPZ1Q9BXG8 430 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 KATNBL1Q9H079 304 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 CDH19Q9H159 772 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 RIOX1Q9H6W3 641 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 LY9Q9HBG7 655 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 CD320Q9NPF0 282 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 PXMP2Q9NR77 195 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 PDGFCQ9NRA1 345 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 SPATA6Q9NWH7 488 aaPredicted RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 DNAJC28Q9NX36 388 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 EDARQ9UNE0 448 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 LUC7L2Q9Y383 392 aaKnown RBP5.88□□□□□ -1.47
CTSS-204ENST00000480760 NUMBLQ9Y6R0 609 aa5.88□□□□□ -1.47
CTSS-204ENST00000480760 KLF18A0A0U1RQI7 1052 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 KLHL33A6NCF5 533 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 KIAA0355O15063 1070 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 TSPAN6O43657 245 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PCDHGA12O60330 932 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 STAM2O75886 525 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 ABLIM3O94929 683 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 SCGB1D2O95969 90 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 LPLP06858 475 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PFKMP08237 780 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 MTHFD2P13995 350 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 RXRAP19793 462 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 EDNRBP24530 442 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 RPL13P26373 211 aaKnown RBP5.87□□□□□ -1.47
CTSS-204ENST00000480760 HOXA13P31271 388 aaPredicted RBP5.87□□□□□ -1.47
CTSS-204ENST00000480760 RAP1GAPP47736 663 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 HSD17B4P51659 736 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 SRSF2Q01130 221 aaKnown RBP5.87□□□□□ -1.47
CTSS-204ENST00000480760 NFATC3Q12968 1075 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PPIGQ13427 754 aaKnown RBP eCLIP5.87□□□□□ -1.47
CTSS-204ENST00000480760 ACAP2Q15057 778 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PKN1Q16512 942 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 WDR72Q3MJ13 1102 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 LRIT3Q3SXY7 679 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PITRM1Q5JRX3 1037 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 PRR31Q5SQ13 230 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 TMEM240Q5SV17 173 aa5.87□□□□□ -1.47
CTSS-204ENST00000480760 CCSAPQ6IQ19 270 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms