RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 KCNV2Q8TDN2 545 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 CPXM1Q96SM3 734 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 TRIM4Q9C037 500 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 STRIP2Q9ULQ0 834 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 MICAL2O94851 1124 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 MYL3P08590 195 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 NIPA2Q8N8Q9 360 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 MAIP1Q8WWC4 291 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 PRCCQ92733 491 aaPredicted RBP17.65■□□□□ 0.42
SH3D21-203ENST00000480549 BARX2Q9UMQ3 279 aaPredicted RBP17.65■□□□□ 0.42
SH3D21-203ENST00000480549 R3HDM2Q9Y2K5 976 aaKnown RBP17.65■□□□□ 0.42
SH3D21-203ENST00000480549 PTPN22Q9Y2R2 807 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 HES2Q9Y543 173 aa17.65■□□□□ 0.42
SH3D21-203ENST00000480549 ATP13A4Q4VNC1 1196 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 DCUN1D2Q6PH85 259 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 ALKAL1Q6UXT8 129 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 FBXO25Q8TCJ0 367 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 ATG4AQ8WYN0 398 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 RBM41Q96IZ5 413 aaKnown RBP17.64■□□□□ 0.41
SH3D21-203ENST00000480549 DCLK3Q9C098 648 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 FAM155AB1AL88 458 aaPredicted RBP17.64■□□□□ 0.41
SH3D21-203ENST00000480549 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 IMPDH2P12268 514 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 NDST1P52848 882 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 DHX9Q08211 1270 aaKnown RBP17.64■□□□□ 0.41
SH3D21-203ENST00000480549 LRIG3Q6UXM1 1119 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 CCHCR1Q8TD31 782 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 NXF3Q9H4D5 531 aaKnown RBP17.64■□□□□ 0.41
SH3D21-203ENST00000480549 FAM124BQ9H5Z6 455 aaPredicted RBP17.64■□□□□ 0.41
SH3D21-203ENST00000480549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.64■□□□□ 0.416e-9■■■■■ 30.6
SH3D21-203ENST00000480549 PCDHGA4Q9Y5G9 962 aa17.64■□□□□ 0.41
SH3D21-203ENST00000480549 PPEF2O14830 753 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 HOXC8P31273 242 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 GJC1P36383 396 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 PLTPP55058 493 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 SNX17Q15036 470 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 FAM133BQ5BKY9 247 aaKnown RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 APBB1IPQ7Z5R6 666 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 PLEKHG4BQ96PX9 1271 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 HEMGNQ9BXL5 484 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 OSBPL8Q9BZF1 889 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 AP5M1Q9H0R1 490 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 TUBGCP4Q9UGJ1 667 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 BLOC1S6Q9UL45 172 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 GOLGA6L10A6NI86 522 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 HMGB1P1B2RPK0 211 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 ZSCAN9O15535 394 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 ERBB2P04626 1255 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 VDRP11473 427 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 CYP3A5P20815 502 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 CRHR2Q13324 411 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 PIGHQ14442 188 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 TAF11Q15544 211 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 CNGA2Q16280 664 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 LRRC38Q5VT99 294 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 XYLT1Q86Y38 959 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 GALNT15Q8N3T1 639 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 KDM4CQ9H3R0 1056 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 KLHL11Q9NVR0 708 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 CENPFP49454 3210 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 LRRD1A4D1F6 860 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 SIGLEC16A6NMB1 481 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 TNPO2O14787 897 aaKnown RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 RFC1P35251 1148 aaPredicted RBP17.63■□□□□ 0.41
SH3D21-203ENST00000480549 GPD2P43304 727 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 MTMR3Q13615 1198 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 TXNRD3NBQ6F5E7 133 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 ARFGAP2Q8N6H7 521 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 JOSD2Q8TAC2 188 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 ZFYVE28Q9HCC9 887 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 CNTN3Q9P232 1028 aa17.63■□□□□ 0.41
SH3D21-203ENST00000480549 PASKQ96RG2 1323 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 GOLGA8SH3BPF8 625 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 LIN7AO14910 233 aaPredicted RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 HMGCRP04035 888 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 PURAQ00577 322 aaKnown RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 CUL3Q13618 768 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 FSCN1Q16658 493 aaKnown RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 TRPV1Q8NER1 839 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 AXLP30530 894 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 GBP1P32455 592 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 GABRB2P47870 512 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 POLE2P56282 527 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 OR2W6PQ8NHA6 318 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 UBLCP1Q8WVY7 318 aaPredicted RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 C18orf25Q96B23 403 aaPredicted RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 RNF25Q96BH1 459 aaPredicted RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 HEXIM2Q96MH2 286 aaKnown RBP17.62■□□□□ 0.41
SH3D21-203ENST00000480549 SLITRK1Q96PX8 696 aa17.62■□□□□ 0.41
SH3D21-203ENST00000480549 M0QYV0 167 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 TP73O15350 636 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 RECQL4O94761 1208 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 PSMC1P62191 440 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 KRT17Q04695 432 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 NFX1Q12986 1120 aaKnown RBP17.61■□□□□ 0.41
SH3D21-203ENST00000480549 SPDYCQ5MJ68 293 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
SH3D21-203ENST00000480549 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms