RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 C8orf48Q96LL4 319 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 SMOQ99835 787 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 UBXN6Q9BZV1 441 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 LHX5Q9H2C1 402 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
CLDN11-205ENST00000480067 ZDHHC7Q9NXF8 308 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 YIPF1Q9Y548 306 aa11.84□□□□□ -0.51
CLDN11-205ENST00000480067 COL4A4P53420 1690 aaPredicted RBP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 COL6A3P12111 3177 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 CCDC195A0A1B0GUA6 201 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 LINC01565O15544 149 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 XYLBO75191 536 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 RFPL2O75678 378 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 CFHP08603 1231 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 HNRNPA1P09651 372 aaKnown RBP eCLIP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 HOXB8P17481 243 aaPredicted RBP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 HOXA9P31269 272 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 GPD2P43304 727 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 GPR15P49685 360 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 GSDMDP57764 484 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 SDHAF4Q5VUM1 108 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 HGSNATQ68CP4 663 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 TRIM72Q6ZMU5 477 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 ZNF571Q7Z3V5 609 aaPredicted RBP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 ITIH5Q86UX2 942 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 TMEM35BQ8NCS4 154 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 GIPC2Q8TF65 315 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 SLC35F5Q8WV83 523 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 PABPC5Q96DU9 382 aaKnown RBP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 SPATA17Q96L03 361 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 CEP295NLQ96MC4 621 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 ZNF512Q96ME7 567 aaPredicted RBP11.83□□□□□ -0.52
CLDN11-205ENST00000480067 NOX5Q96PH1 765 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 PANX2Q96RD6 677 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 TMEM30AQ9NV96 361 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 ASB3Q9Y575 518 aa11.83□□□□□ -0.52
CLDN11-205ENST00000480067 XPO1O14980 1071 aaKnown RBP11.82□□□□□ -0.52
CLDN11-205ENST00000480067 CCL16O15467 120 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 LSM8O95777 96 aaKnown RBP11.82□□□□□ -0.52
CLDN11-205ENST00000480067 GLP2RO95838 553 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 CHRNB2P17787 502 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 ATF6P18850 670 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 FMO1Q01740 532 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 ANKRD54Q6NXT1 300 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 WDR59Q6PJI9 974 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 TMC5Q6UXY8 1006 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 DENND5BQ6ZUT9 1274 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 PIGZQ86VD9 579 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 NUP93Q8N1F7 819 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 C12orf76Q8N812 135 aaPredicted RBP11.82□□□□□ -0.52
CLDN11-205ENST00000480067 ZMIZ2Q8NF64 920 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLDN11-205ENST00000480067 PRKD2Q9BZL6 878 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 DEF6Q9H4E7 631 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 SFXN1Q9H9B4 322 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 PIDD1Q9HB75 910 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 PNPLA8Q9NP80 782 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 ST7Q9NRC1 585 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 EHD2Q9NZN4 543 aa11.82□□□□□ -0.52
CLDN11-205ENST00000480067 SPTBN5Q9NRC6 3674 aaKnown RBP11.81□□□□□ -0.52
CLDN11-205ENST00000480067 TULP2O00295 520 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 PLEKP08567 350 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CSH1P0DML2 217 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CSH2P0DML3 217 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 PLA2G4AP47712 749 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 RGS7P49802 495 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 SNX16P57768 344 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CDK17Q00537 523 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 NAA35Q5VZE5 725 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 PMF1Q6P1K2 205 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CCDC186Q7Z3E2 898 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 DNAJB7Q7Z6W7 309 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-205ENST00000480067 WDTC1Q8N5D0 677 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 STK32AQ8WU08 396 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CPA5Q8WXQ8 436 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 PSMG2Q969U7 264 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 HSFY1Q96LI6 401 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CCDC42Q96M95 316 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 LRRC4Q9HBW1 653 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 CLEC1BQ9P126 229 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 ADAMTS1Q9UHI8 967 aa11.81□□□□□ -0.52
CLDN11-205ENST00000480067 MAGED2Q9UNF1 606 aaPredicted RBP11.81□□□□□ -0.52
CLDN11-205ENST00000480067 SLC38A8A6NNN8 435 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 RTN3O95197 1032 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 EIF4A3P38919 411 aaKnown RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 NSFP46459 744 aaKnown RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SLC5A3P53794 718 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 IFRD2Q12894 506 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 COL19A1Q14993 1142 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 RARS2Q5T160 578 aaKnown RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 CES5AQ6NT32 575 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 ERICH1Q86X53 443 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SIX6OS1Q8N1H7 587 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 MSANTD4Q8NCY6 345 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms