RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 HCRTO43612 131 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 GDF10P55107 478 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 HUNKP57058 714 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 SNX17Q15036 470 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 PKDCCQ504Y2 493 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 CYP4V2Q6ZWL3 525 aaPredicted RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 EXOC3L1Q86VI1 746 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 RELL1Q8IUW5 271 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 BEST2Q8NFU1 509 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 RXFP2Q8WXD0 754 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 SERPINB12Q96P63 405 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 ASNSD1Q9NWL6 643 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 TPX2Q9ULW0 747 aaKnown RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 FOXO6A8MYZ6 492 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 TRIM66O15016 1216 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 PDGFRAP16234 1089 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 PECAM1P16284 738 aaPredicted RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 GPD1P21695 349 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 PSEN2P49810 448 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 ACAP1Q15027 740 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 CDO1Q16878 200 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 SOWAHAQ2M3V2 549 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 ERMARDQ5T6L9 678 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 C9orf57Q5W0N0 161 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 XPO6Q96QU8 1125 aaKnown RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 STMN4Q9H169 189 aaPredicted RBP13.65□□□□□ -0.22
SEC13-216ENST00000479868 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 KLK14Q9P0G3 267 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 FAM169AQ9Y6X4 670 aa13.65□□□□□ -0.22
SEC13-216ENST00000479868 HAS3O00219 553 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 MYL3P08590 195 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CYP2B6P20813 491 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 PCK1P35558 622 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 MAGEA4P43358 317 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CDR1P51861 262 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 TAF1CQ15572 869 aaPredicted RBP13.64□□□□□ -0.23
SEC13-216ENST00000479868 QPCTQ16769 361 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 RNASEH2BQ5TBB1 312 aaKnown RBP13.64□□□□□ -0.23
SEC13-216ENST00000479868 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 RFX6Q8HWS3 928 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 LRRC52Q8N7C0 313 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
SEC13-216ENST00000479868 CENPTQ96BT3 561 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CFAP57Q96MR6 1250 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CNPY3Q9BT09 278 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CALN1Q9BXU9 219 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 GABBR2O75899 941 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 CREB1P16220 341 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 FASTKD3Q14CZ7 662 aaKnown RBP13.64□□□□□ -0.23
SEC13-216ENST00000479868 PCBP1Q15365 356 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC13-216ENST00000479868 STILQ15468 1287 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 HP1BP3Q5SSJ5 553 aaPredicted RBP13.64□□□□□ -0.23
SEC13-216ENST00000479868 OLFML1Q6UWY5 402 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 OR6B3Q8NGW1 331 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 USP6NLQ92738 828 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 SAYSD1Q9NPB0 183 aa13.64□□□□□ -0.23
SEC13-216ENST00000479868 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC13-216ENST00000479868 SMIM28A0A1B0GU29 152 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 CORO7P57737 925 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 ATP11AP98196 1134 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 IRF5Q13568 498 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 MORF4L2Q15014 288 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 CCDC14Q49A88 953 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 B4GALNT4Q76KP1 1039 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 TTC13Q8NBP0 860 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
SEC13-216ENST00000479868 SLC4A5Q9BY07 1137 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 B3GNT5Q9BYG0 378 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 FOXP3Q9BZS1 431 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 GOLGA2P5Q9HBQ8 144 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 UBQLN1Q9UMX0 589 aaKnown RBP13.63□□□□□ -0.23
SEC13-216ENST00000479868 APOC4-APOC2K7ER74 178 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 SPTLC1O15269 473 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 TCEA3O75764 348 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 ENDOD1O94919 500 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 APOC2P02655 101 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 CPT1AP50416 773 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 CDH6P55285 790 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 TAOK1Q7L7X3 1001 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 SESTD1Q86VW0 696 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 RASAL3Q86YV0 1011 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 CYP4X1Q8N118 509 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 KBTBD7Q8WVZ9 684 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 PRCCQ92733 491 aaPredicted RBP13.63□□□□□ -0.23
SEC13-216ENST00000479868 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
SEC13-216ENST00000479868 MIS12Q9H081 205 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 TBK1Q9UHD2 729 aa13.63□□□□□ -0.23
SEC13-216ENST00000479868 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
SEC13-216ENST00000479868 A8MXQ7 604 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 PIRO00625 290 aa13.62□□□□□ -0.23
SEC13-216ENST00000479868 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms