RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 APOBEC3GQ9HC16 384 aaKnown RBP9.49□□□□□ -0.89
DDX56-211ENST00000479602 GCNT4Q9P109 453 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 CDH9Q9ULB4 789 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 KIAA1257Q9ULG3 409 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 PCDHGA2Q9Y5H1 932 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 INSL5Q9Y5Q6 135 aa9.49□□□□□ -0.89
DDX56-211ENST00000479602 PATJQ8NI35 1801 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 A0A1W2PQJ5 194 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 CYB561D2O14569 222 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ZNF197O14709 1029 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 PHACTR2O75167 634 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 CILPO75339 1184 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 PAEPP09466 180 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ATP1A3P13637 1013 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 TRIM21P19474 475 aaKnown RBP9.48□□□□□ -0.89
DDX56-211ENST00000479602 PON1P27169 355 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 WEE1P30291 646 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 MAGEA11P43364 429 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 GUCY2FP51841 1108 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ADCY1Q08828 1119 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 CUL2Q13617 745 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 NR1I3Q14994 352 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 STILQ15468 1287 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 FILIP1LQ4L180 1135 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 FKBP15Q5T1M5 1219 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 LMBRD2Q68DH5 695 aaPredicted RBP9.48□□□□□ -0.89
DDX56-211ENST00000479602 OVOS1Q6IE37 1185 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 FAM171BQ6P995 826 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ZNF852Q6ZMS4 543 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 LUZP1Q86V48 1076 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 METTL23Q86XA0 190 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 TMC8Q8IU68 726 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ADGRF2Q8IZF7 708 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 HS6ST3Q8IZP7 471 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ING5Q8WYH8 240 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 EEF2KMTQ96G04 330 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 TNIP3Q96KP6 325 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 LRRC3BQ96PB8 259 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 TTYH3Q9C0H2 523 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 INTS2Q9H0H0 1204 aaKnown RBP9.48□□□□□ -0.89
DDX56-211ENST00000479602 ZCWPW1Q9H0M4 648 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 EPC1Q9H2F5 836 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 ZNF334Q9HCZ1 680 aaPredicted RBP9.48□□□□□ -0.89
DDX56-211ENST00000479602 PNPLA8Q9NP80 782 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 SIX2Q9NPC8 291 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 HEBP1Q9NRV9 189 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 POLIQ9UNA4 740 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 SNX9Q9Y5X1 595 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 NCANO14594 1321 aa9.48□□□□□ -0.89
DDX56-211ENST00000479602 CBFA2T2O43439 604 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 KRT19P08727 400 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 ACO1P21399 889 aaKnown RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 TSPY1Q01534 308 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 FCHO2Q0JRZ9 810 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 KCNMA1Q12791 1236 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 MTAPQ13126 283 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 TRIM14Q14142 442 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 GAS6Q14393 721 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 CTXN3Q4LDR2 81 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 INTS6LQ5JSJ4 861 aaKnown RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 ZC3H14Q6PJT7 736 aaKnown RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 VITQ6UXI7 678 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 DSTYKQ6XUX3 929 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 MFSD6LQ8IWD5 586 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 DCP1BQ8IZD4 617 aaKnown RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 THEM5Q8N1Q8 247 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 LEMD2Q8NC56 503 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 SPPL2BQ8TCT7 592 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 SMARCD2Q92925 531 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 RSPRY1Q96DX4 576 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 MRFAP1L1Q96HT8 127 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 NUP58Q9BVL2 599 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 FAM126AQ9BYI3 521 aaPredicted RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 NUCKS1Q9H1E3 243 aaKnown RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 GANQ9H2C0 597 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 CYP4F11Q9HBI6 524 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 ZFP14Q9HCL3 533 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 CEP295Q9C0D2 2601 aa9.47□□□□□ -0.89
DDX56-211ENST00000479602 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
DDX56-211ENST00000479602 SDK1Q7Z5N4 2213 aa9.46□□□□□ -0.89
DDX56-211ENST00000479602 SOBPA7XYQ1 873 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 MAN2B1O00754 1011 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 LAMTOR5O43504 91 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 LRG1P02750 347 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 CHRNB1P11230 501 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 UCHL3P15374 230 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 PSMC3P17980 439 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 CDK11BP21127 795 aaKnown RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 ELF1P32519 619 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 VIPR2P41587 438 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 MFAP3P55082 362 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 JAM2P57087 298 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 FANCCQ00597 558 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 CSTF1Q05048 431 aaKnown RBP9.46□□□□□ -0.9
DDX56-211ENST00000479602 CYP4A22Q5TCH4 519 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 KLHDC7AQ5VTJ3 777 aa9.46□□□□□ -0.9
DDX56-211ENST00000479602 WSCD1Q658N2 575 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms