RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 MAGEA11P43364 429 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 PLA2G4AP47712 749 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 NDUFV1P49821 464 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 GALCP54803 685 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 ADCY1Q08828 1119 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 SMC1AQ14683 1233 aaKnown RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 RAB41Q5JT25 222 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 MMS22LQ6ZRQ5 1243 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 BHLHA9Q7RTU4 235 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 SPATA2LQ8IUW3 424 aaPredicted RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 TMEM35BQ8NCS4 154 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 KIAA1524Q8TCG1 905 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 CLEC4CQ8WTT0 213 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 SMARCD1Q96GM5 515 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 FUBP3Q96I24 572 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD3-210ENST00000479080 C11orf70Q9BRQ4 267 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 THAP2Q9H0W7 228 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 ENTPD7Q9NQZ7 604 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.85□□□□□ -0.19
CHD3-210ENST00000479080 STK39Q9UEW8 545 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 AFF4Q9UHB7 1163 aaKnown RBP13.85□□□□□ -0.19
CHD3-210ENST00000479080 SLC27A5Q9Y2P5 690 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 PPP2R2CQ9Y2T4 447 aa13.85□□□□□ -0.19
CHD3-210ENST00000479080 E5RJQ4 531 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 TGM5O43548 720 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 GJB6O95452 261 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 MAGEA1P43355 309 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 GABRB2P47870 512 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 VAV2P52735 878 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 DUSP4Q13115 394 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 MAPRE1Q15691 268 aaKnown RBP13.84□□□□□ -0.19
CHD3-210ENST00000479080 NFE2Q16621 373 aaPredicted RBP13.84□□□□□ -0.19
CHD3-210ENST00000479080 DDR2Q16832 855 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 CYP4A22Q5TCH4 519 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 C4orf50Q6ZRC1 276 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 PHLDB2Q86SQ0 1253 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 TMEM110Q86TL2 294 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 XYLT1Q86Y38 959 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 SPPL2BQ8TCT7 592 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 STK32AQ8WU08 396 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 KHSRPQ92945 711 aaKnown RBP eCLIP13.84□□□□□ -0.19
CHD3-210ENST00000479080 ABCB6Q9NP58 842 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 HESX1Q9UBX0 185 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 FBXW11Q9UKB1 542 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 ZKSCAN5Q9Y2L8 839 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 DUSP10Q9Y6W6 482 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 ATP8B3O60423 1300 aa13.84□□□□□ -0.19
CHD3-210ENST00000479080 PJA2O43164 708 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 PAPSS1O43252 624 aaPredicted RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 CLASP2O75122 1294 aaKnown RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 SPATA31D3P0C874 917 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 ATF2P15336 505 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 RRM1P23921 792 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 CLCN4P51793 760 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 GSCP56915 257 aaPredicted RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 USP46P62068 366 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 RBM10P98175 930 aaKnown RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 PPP1R15BQ5SWA1 713 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 PRPF38BQ5VTL8 546 aaKnown RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 TPGS2Q68CL5 300 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 TRNP1Q6NT89 227 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 SPATA31D4Q6ZUB0 917 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 FAM183BPQ6ZVS7 135 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 VPS36Q86VN1 386 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 VN1R2Q8NFZ6 395 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 ZNF461Q8TAF7 563 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 GPR152Q8TDT2 470 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 SLC22A17Q8WUG5 538 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 KCTD13Q8WZ19 329 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 NDRG1Q92597 394 aaKnown RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 PPP1R13BQ96KQ4 1090 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 C8orf48Q96LL4 319 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 LMAN2LQ9H0V9 348 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 PDCL3Q9H2J4 239 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 ZNF576Q9H609 170 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 DMAP1Q9NPF5 467 aaPredicted RBP13.83□□□□□ -0.2
CHD3-210ENST00000479080 COG5Q9UP83 839 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 YIPF1Q9Y548 306 aa13.83□□□□□ -0.2
CHD3-210ENST00000479080 TRANK1O15050 2925 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 CYP1A2P05177 515 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 H2AFZP0C0S5 128 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 TMEM253P0C7T8 217 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 EPCAMP16422 314 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 ABCB4P21439 1286 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 CA8P35219 290 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 GTF2F1P35269 517 aaKnown RBP eCLIP13.82□□□□□ -0.2
CHD3-210ENST00000479080 NSFP46459 744 aaKnown RBP13.82□□□□□ -0.2
CHD3-210ENST00000479080 PGFP49763 221 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 SLC5A3P53794 718 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 CREMQ03060 361 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 C1QBPQ07021 282 aaKnown RBP13.82□□□□□ -0.2
CHD3-210ENST00000479080 SMARCB1Q12824 385 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 OLFML1Q6UWY5 402 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 VSTM1Q6UX27 236 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 H2AFVQ71UI9 128 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 SCN4BQ8IWT1 228 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 TCEAL8Q8IYN2 117 aa13.82□□□□□ -0.2
CHD3-210ENST00000479080 SCAMP5Q8TAC9 235 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms