RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 SLC6A14Q9UN76 642 aa18.42■□□□□ 0.54
VIM-204ENST00000478746 SGK1O00141 431 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 LEFTY2O00292 366 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 APODP05090 189 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 ITPKAP23677 461 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 POLR2BP30876 1174 aaKnown RBP18.41■□□□□ 0.54
VIM-204ENST00000478746 SLC6A11P48066 632 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 ZXDBP98169 803 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 TFAMQ00059 246 aaKnown RBP18.41■□□□□ 0.54
VIM-204ENST00000478746 GFPT1Q06210 699 aaPredicted RBP18.41■□□□□ 0.54
VIM-204ENST00000478746 DUOXA1Q1HG43 343 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 HSF5Q4G112 596 aaPredicted RBP18.41■□□□□ 0.54
VIM-204ENST00000478746 RILPL1Q5EBL4 403 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 EOGTQ5NDL2 527 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 EMC10Q5UCC4 262 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 MCTP1Q6DN14 999 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 CEP76Q8TAP6 659 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 HMGB4Q8WW32 186 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 POMGNT1Q8WZA1 660 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 CALML4Q96GE6 196 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 FUBP3Q96I24 572 aaKnown RBP eCLIP18.41■□□□□ 0.54
VIM-204ENST00000478746 FIZ1Q96SL8 496 aa18.41■□□□□ 0.54
VIM-204ENST00000478746 SLC26A4O43511 780 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 OPHN1O60890 802 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 TBCAO75347 108 aaKnown RBP18.4■□□□□ 0.54
VIM-204ENST00000478746 CYP17A1P05093 508 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 ITGB3P05106 788 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 PFKLP17858 780 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 HOXD12P35452 270 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 LHX1P48742 406 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 MCM6Q14566 821 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 POSTNQ15063 836 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 DHCR24Q15392 516 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 MAP7D1Q3KQU3 841 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 ARL6IP4Q66PJ3 421 aaKnown RBP18.4■□□□□ 0.54
VIM-204ENST00000478746 FILIP1Q7Z7B0 1213 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 PROSER1Q86XN7 944 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 SFTPA1Q8IWL2 248 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 CACTINQ8WUQ7 758 aaKnown RBP18.4■□□□□ 0.54
VIM-204ENST00000478746 FSCN3Q9NQT6 498 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 TRPM5Q9NZQ8 1165 aa18.4■□□□□ 0.54
VIM-204ENST00000478746 ATXN2Q99700 1313 aaKnown RBP18.4■□□□□ 0.54
VIM-204ENST00000478746 TNRC6BQ9UPQ9 1833 aaKnown RBP18.39■□□□□ 0.54
VIM-204ENST00000478746 ADAMTS9Q9P2N4 1935 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 ITPR1Q14643 2758 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 SLC9A3R1O14745 358 aaPredicted RBP18.39■□□□□ 0.53
VIM-204ENST00000478746 AP5Z1O43299 807 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 KAT7O95251 611 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 PCSK1P29120 753 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 UBA7P41226 1012 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 MAGEA11P43364 429 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 FAM193AP78312 1265 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 ZNF423Q2M1K9 1284 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 PEAR1Q5VY43 1037 aaPredicted RBP18.39■□□□□ 0.53
VIM-204ENST00000478746 OSTM1Q86WC4 334 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 CSGALNACT2Q8N6G5 542 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 C1orf127Q8N9H9 656 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 AK8Q96MA6 479 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 ST6GALNAC4Q9H4F1 302 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 BLOC1S4Q9NUP1 217 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 GDAP2Q9NXN4 497 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 MAGEC2Q9UBF1 373 aaPredicted RBP18.39■□□□□ 0.53
VIM-204ENST00000478746 SNX9Q9Y5X1 595 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 ADAMTS20P59510 1910 aa18.39■□□□□ 0.53
VIM-204ENST00000478746 FREM2Q5SZK8 3169 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 A0A0A0MRY4 1105 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 TCRBV21S2A2A0A5A6 115 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 CAPNS1P04632 268 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 SERPINF2P08697 491 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 ADSSP30520 456 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 EIF2DP41214 584 aaKnown RBP18.38■□□□□ 0.53
VIM-204ENST00000478746 GRIA2P42262 883 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 TNFRSF4P43489 277 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 KIR2DL1P43626 348 aaPredicted RBP18.38■□□□□ 0.53
VIM-204ENST00000478746 MESP2Q0VG99 397 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 RESTQ13127 1097 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 HNRNPDQ14103 355 aaKnown RBP18.38■□□□□ 0.53
VIM-204ENST00000478746 FAM171BQ6P995 826 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 C19orf48Q6RUI8 117 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 C4orf50Q6ZRC1 276 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 RAB44Q7Z6P3 723 aaPredicted RBP18.38■□□□□ 0.53
VIM-204ENST00000478746 ADGRF2Q8IZF7 708 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 DEFB119Q8N690 84 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 LRRC52Q8N7C0 313 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 KIAA1958Q8N8K9 716 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 SPATA17Q96L03 361 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 FAM213AQ9BRX8 229 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 RNF38Q9H0F5 515 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 IKZF4Q9H2S9 585 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 ARHGEF4Q9NR80 690 aa18.38■□□□□ 0.53
VIM-204ENST00000478746 MYO18AQ92614 2054 aaKnown RBP18.38■□□□□ 0.53
VIM-204ENST00000478746 HELZP42694 1942 aaKnown RBP18.37■□□□□ 0.53
VIM-204ENST00000478746 MYOFQ9NZM1 2061 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 GABRDO14764 452 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 HCRTO43612 131 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 ADAM23O75077 832 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 SEC24BO95487 1268 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 KRT19P08727 400 aa18.37■□□□□ 0.53
VIM-204ENST00000478746 PLCG1P19174 1290 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms