RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 UBE4AQ14139 1066 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 ERCC6LQ2NKX8 1250 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 CERCAMQ5T4B2 595 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 SYCP2LQ5T4T6 812 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 ZNF618Q5T7W0 954 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 DEPDC1Q5TB30 811 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 KLHDC7AQ5VTJ3 777 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 OSCP1Q8WVF1 389 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 ELAC2Q9BQ52 826 aaKnown RBP4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 COLEC11Q9BWP8 271 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 GLOD4Q9HC38 313 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 CHST12Q9NRB3 414 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 TBC1D23Q9NUY8 699 aa4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 DNMT3BQ9UBC3 853 aaKnown RBP4.74□□□□□ -1.65
SMARCA1-204ENST00000478420 SALL3Q9BXA9 1300 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 WDR33Q9C0J8 1336 aaKnown RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 AQP7P3A6NL99 342 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 APOL1O14791 398 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 RRP9O43818 475 aaKnown RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 SRGAP2O75044 1071 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 PIAS2O75928 621 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 URI1O94763 535 aaPredicted RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 ZFXP17010 805 aaPredicted RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 FGFR2P21802 821 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 ADORA2AP29274 412 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 CXCR5P32302 372 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 PLA2G5P39877 138 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 GRIA3P42263 894 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 ITGA8P53708 1063 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 SP2Q02086 613 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 CCNIQ14094 377 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 ZNF169Q14929 603 aaPredicted RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 BRD3Q15059 726 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 NPY5RQ15761 445 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 PTCHD3Q3KNS1 767 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 PLAC9Q5JTB6 97 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 FAM209BQ5JX69 171 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 FCRL6Q6DN72 434 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 BEND5Q7L4P6 421 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 KCTD20Q7Z5Y7 419 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 SRLQ86TD4 932 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 PEG10Q86TG7 708 aaKnown RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 FAM186BQ8IYM0 893 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 ABRAQ8N0Z2 381 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 RNF152Q8N8N0 203 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 DNAJB14Q8TBM8 379 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 TMEM171Q8WVE6 324 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 RFKQ969G6 155 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 RIPOR3Q96MK2 946 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 SORCS2Q96PQ0 1159 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 FAM83DQ9H4H8 585 aa4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 GBA2Q9HCG7 927 aaPredicted RBP4.73□□□□□ -1.65
SMARCA1-204ENST00000478420 A0A1W2PPC4 97 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 A1L4Q6 167 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 AREL1O15033 823 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 TTLL1O95922 423 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 ONECUT2O95948 504 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 A1BGP04217 495 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 NR2F6P10588 404 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 ALDH9A1P49189 494 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 MAPK10P53779 464 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 ATXN1P54253 815 aaKnown RBP4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 ZNF750Q32MQ0 723 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 TREML2Q5T2D2 321 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 RRAGBQ5VZM2 374 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 PLAG1Q6DJT9 500 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 MAVSQ7Z434 540 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 CERS3Q8IU89 383 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 IZUMO1Q8IYV9 350 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 ACRBPQ8NEB7 543 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 BRI3BPQ8WY22 251 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 GLG1Q92896 1179 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 GJA10Q969M2 543 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 CHFRQ96EP1 664 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 PDLIM2Q96JY6 352 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 MRIQ9BWK5 157 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 TRIM5Q9C035 493 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 NLRC4Q9NPP4 1024 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 HEYLQ9NQ87 328 aaPredicted RBP4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 FOXJ2Q9P0K8 574 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 MYO1AQ9UBC5 1043 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 DKK3Q9UBP4 350 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 DKK4Q9UBT3 224 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 SH2B3Q9UQQ2 575 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 DMRT1Q9Y5R6 373 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 SNX14Q9Y5W7 946 aa4.72□□□□□ -1.65
SMARCA1-204ENST00000478420 CLCA1A8K7I4 914 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CD3EAPO15446 510 aaKnown RBP4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 NCK2O43639 380 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 FESP07332 822 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 IL6RP08887 468 aaPredicted RBP4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 TYRP1P17643 537 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 PROZP22891 400 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 EPHA3P29320 983 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 LIPAP38571 399 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 RARRES1P49788 294 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 CLCN2P51788 898 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 BCAT1P54687 386 aa4.71□□□□□ -1.66
SMARCA1-204ENST00000478420 SIM1P81133 766 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms