RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 GPR152Q8TDT2 470 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 PRKD2Q9BZL6 878 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 S1PR5Q9H228 398 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 PNPLA8Q9NP80 782 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 HESX1Q9UBX0 185 aa21.1■□□□□ 0.97
ACTB-210ENST00000477812 CCDC195A0A1B0GUA6 201 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 CCL16O15467 120 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 HMGA1P17096 107 aaKnown RBP21.09■□□□□ 0.97
ACTB-210ENST00000477812 GPD2P43304 727 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 ALDH1A3P47895 512 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 FMO1Q01740 532 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 CDR2Q01850 454 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 BST2Q10589 180 aaKnown RBP21.09■□□□□ 0.97
ACTB-210ENST00000477812 TAF3Q5VWG9 929 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 TMC5Q6UXY8 1006 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 GPRIN1Q7Z2K8 1008 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 ZNF677Q86XU0 584 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 TC2NQ8N9U0 490 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 STKLD1Q8NE28 680 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 SLC35F5Q8WV83 523 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 SECISBP2LQ93073 1101 aaKnown RBP21.09■□□□□ 0.97
ACTB-210ENST00000477812 PSMG2Q969U7 264 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 UBXN6Q9BZV1 441 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 LHX5Q9H2C1 402 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 UBE2ZQ9H832 354 aaPredicted RBP21.09■□□□□ 0.97
ACTB-210ENST00000477812 ABHD10Q9NUJ1 306 aa21.09■□□□□ 0.97
ACTB-210ENST00000477812 COL6A3P12111 3177 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 GREB1Q4ZG55 1949 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 XPO1O14980 1071 aaKnown RBP21.08■□□□□ 0.97
ACTB-210ENST00000477812 GABBR2O75899 941 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 LRG1P02750 347 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 MMEP08473 750 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 CCDC172P0C7W6 258 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 CDH5P33151 784 aaPredicted RBP21.08■□□□□ 0.97
ACTB-210ENST00000477812 PLA2G4AP47712 749 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 EPHB3P54753 998 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 RARS2Q5T160 578 aaKnown RBP21.08■□□□□ 0.97
ACTB-210ENST00000477812 WDR59Q6PJI9 974 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 GPR149Q86SP6 731 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 PIGZQ86VD9 579 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 CNGA4Q8IV77 575 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 WDTC1Q8N5D0 677 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 SMRP1Q8NCR6 262 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 OR8K1Q8NGG5 319 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 GIPC2Q8TF65 315 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 PPM1EQ8WY54 764 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 LRRC3Q9BY71 257 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 SPTBN5Q9NRC6 3674 aaKnown RBP21.08■□□□□ 0.97
ACTB-210ENST00000477812 IL37Q9NZH6 218 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 CYTH4Q9UIA0 394 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 ASB3Q9Y575 518 aa21.08■□□□□ 0.97
ACTB-210ENST00000477812 SLC38A8A6NNN8 435 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 AKR1B15C9JRZ8 316 aaPredicted RBP21.07■□□□□ 0.96
ACTB-210ENST00000477812 RPL34P49207 117 aaKnown RBP21.07■□□□□ 0.96
ACTB-210ENST00000477812 EPHA5P54756 1037 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 ADKP55263 362 aaKnown RBP21.07■□□□□ 0.96
ACTB-210ENST00000477812 USP46P62068 366 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 MTMR3Q13615 1198 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 RAB41Q5JT25 222 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 CYP26C1Q6V0L0 522 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 DNAJB7Q7Z6W7 309 aaPredicted RBP21.07■□□□□ 0.96
ACTB-210ENST00000477812 TMC8Q8IU68 726 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 PASD1Q8IV76 773 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 MYRFLQ96LU7 910 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 PCDHB18PQ96TA0 734 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 TTLL2Q9BWV7 592 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 HAUS4Q9H6D7 363 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 CDH22Q9UJ99 828 aa21.07■□□□□ 0.96
ACTB-210ENST00000477812 C2orf16Q68DN1 1984 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 NOTCH4Q99466 2003 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 XYLBO75191 536 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 LSM8O95777 96 aaKnown RBP21.06■□□□□ 0.96
ACTB-210ENST00000477812 TPM1P09493 284 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 SKILP12757 684 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 ANXA13P27216 316 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 SLC5A3P53794 718 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 VEPH1Q14D04 833 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 PMF1Q6P1K2 205 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 ZNF571Q7Z3V5 609 aaPredicted RBP21.06■□□□□ 0.96
ACTB-210ENST00000477812 DRC7Q8IY82 874 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 STK32AQ8WU08 396 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 KCTD13Q8WZ19 329 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 SMG7Q92540 1137 aaKnown RBP21.06■□□□□ 0.96
ACTB-210ENST00000477812 TRMT2BQ96GJ1 504 aaKnown RBP21.06■□□□□ 0.96
ACTB-210ENST00000477812 AGPAT1Q99943 283 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 ZNF334Q9HCZ1 680 aaPredicted RBP21.06■□□□□ 0.96
ACTB-210ENST00000477812 HCFC1R1Q9NWW0 138 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 ARHGAP20Q9P2F6 1191 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 IMPACTQ9P2X3 320 aa21.06■□□□□ 0.96
ACTB-210ENST00000477812 DOCK6Q96HP0 2047 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 MYH10P35580 1976 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 FAM92AA1XBS5 289 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 SPDYE4A6NLX3 237 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 H3BQ06 376 aaPredicted RBP21.05■□□□□ 0.96
ACTB-210ENST00000477812 CYP1A1P04798 512 aaPredicted RBP21.05■□□□□ 0.96
ACTB-210ENST00000477812 SERPING1P05155 500 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 KCNA5P22460 613 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 KIF11P52732 1056 aa21.05■□□□□ 0.96
ACTB-210ENST00000477812 SLC8A3P57103 927 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms