RNA–Protein interactions for RNA: ENST00000477583.1

CACUL1-202, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-202ENST00000477583 PNPLA8Q9NP80 782 aa3.14□□□□□ -1.91
CACUL1-202ENST00000477583 A1CFQ9NQ94 594 aaKnown RBP3.14□□□□□ -1.91
CACUL1-202ENST00000477583 INTS13Q9NVM9 706 aa3.14□□□□□ -1.91
CACUL1-202ENST00000477583 ENTPD2Q9Y5L3 495 aa3.14□□□□□ -1.91
CACUL1-202ENST00000477583 CCDC151A5D8V7 595 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 MBD3L4A6NDZ8 208 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 MBD3L3A6NE82 208 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 POM121BA6NF01 834 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 hCG_1984214I3L0E3 225 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 FOXN3O00409 490 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 YY2O15391 372 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 RASSF9O75901 435 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 IL18RAPO95256 599 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 PARP1P09874 1014 aaKnown RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 IFIT2P09913 472 aaKnown RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 CYP2C9P11712 490 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 XRCC6P12956 609 aaKnown RBP eCLIP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 PPP3CBP16298 524 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 TSHRP16473 764 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 KLRC1P26715 233 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 CD6P30203 668 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 TM4SF4P48230 202 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 PXNP49023 591 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 HNRNPMP52272 730 aaKnown RBP eCLIP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 MAPK10P53779 464 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 AK2P54819 239 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 LOXL3P58215 753 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 HTRA4P83105 476 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 HDAC1Q13547 482 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 SRSF7Q16629 238 aaKnown RBP eCLIP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 ZIK1Q3SY52 487 aaPredicted RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 TSTD2Q5T7W7 516 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 KLHDC7AQ5VTJ3 777 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 UNC13DQ70J99 1090 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 SRLQ86TD4 932 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 PEG10Q86TG7 708 aaKnown RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 GAS2L3Q86XJ1 694 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 HASPINQ8TF76 798 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 DDB2Q92466 427 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 LPIN2Q92539 896 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 SPSB4Q96A44 273 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 SNX22Q96L94 193 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 ELAC2Q9BQ52 826 aaKnown RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 BRIP1Q9BX63 1249 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 STK31Q9BXU1 1019 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 AMBRA1Q9C0C7 1298 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 ZNF700Q9H0M5 742 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 FNIP2Q9P278 1114 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 ITGB1BP2Q9UKP3 347 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 SHOC2Q9UQ13 582 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 MRPS17Q9Y2R5 130 aaKnown RBP3.13□□□□□ -1.91
CACUL1-202ENST00000477583 PAXBP1Q9Y5B6 917 aa3.13□□□□□ -1.91
CACUL1-202ENST00000477583 RASA4BC9J798 803 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MPPED1O15442 326 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 RASA4O43374 803 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 NCK2O43639 380 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TRIAP1O43715 76 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MT-ND5P03915 603 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CELA2AP08217 269 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 SRGNP10124 158 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TXNP10599 105 aaKnown RBP3.12□□□□□ -1.91
CACUL1-202ENST00000477583 WT1P19544 449 aaPredicted RBP3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TNFSF4P23510 183 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 STT3AP46977 705 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CARSP49589 748 aaKnown RBP3.12□□□□□ -1.91
CACUL1-202ENST00000477583 RHBDL3P58872 404 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 KRT17Q04695 432 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MYO1EQ12965 1108 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 NBPF8Q3BBV2 869 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 ARHGAP40Q5TG30 622 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 KAZNQ674X7 775 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 KIAA0895LQ68EN5 471 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 ZNF425Q6IV72 752 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TSHZ1Q6ZSZ6 1077 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 DPP9Q86TI2 863 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 FAM109AQ8N4B1 249 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CCDC33Q8N5R6 958 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 RNF152Q8N8N0 203 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MYCBPAPQ8TBZ2 947 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 DPF1Q92782 380 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 GJA10Q969M2 543 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 FAM136AQ96C01 138 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 FBXL20Q96IG2 436 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TNIP3Q96KP6 325 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CCDC138Q96M89 665 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 RIPOR3Q96MK2 946 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 OSBPL9Q96SU4 736 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MYD88Q99836 296 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 PTDSS2Q9BVG9 487 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 ACTRT3Q9BYD9 372 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 TPSD1Q9BZJ3 242 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CHST8Q9H2A9 424 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 CXorf36Q9H7Y0 433 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 STARD7Q9NQZ5 370 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 ZSCAN32Q9NX65 697 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 MID2Q9UJV3 735 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 HDAC9Q9UKV0 1011 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.12□□□□□ -1.91
CACUL1-202ENST00000477583 WNT6Q9Y6F9 365 aa3.12□□□□□ -1.91
CACUL1-202ENST00000477583 LOC102723971A0A1B0GUV8 181 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms