RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 NOTCH4Q99466 2003 aa17.11■□□□□ 0.33
VHL-203ENST00000477538 A0A087X0T9 212 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 SOWAHDA6NJG2 315 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 TULP2O00295 520 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 NRDCO43847 1150 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 FAM228BP0C875 321 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 EPCAMP16422 314 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 KIF11P52732 1056 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 RPL10AP62906 217 aaKnown RBP17.1■□□□□ 0.33
VHL-203ENST00000477538 ADGRE1Q14246 886 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 ASTE1Q2TB18 679 aaPredicted RBP17.1■□□□□ 0.33
VHL-203ENST00000477538 TCEAL5Q5H9L2 206 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 CCDC149Q6ZUS6 474 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 SLC7A14Q8TBB6 771 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 SLC35F5Q8WV83 523 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 C8orf48Q96LL4 319 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 GAS2L1Q99501 681 aaPredicted RBP17.1■□□□□ 0.33
VHL-203ENST00000477538 MAN1C1Q9NR34 630 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 INSL5Q9Y5Q6 135 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 HCFC2Q9Y5Z7 792 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 MTCH2Q9Y6C9 303 aa17.1■□□□□ 0.33
VHL-203ENST00000477538 FAM170AA1A519 330 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 C8AP07357 584 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 UNGP13051 313 aaPredicted RBP17.09■□□□□ 0.33
VHL-203ENST00000477538 POU3F3P20264 500 aaPredicted RBP17.09■□□□□ 0.33
VHL-203ENST00000477538 IGFBP4P22692 258 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 CYLC1P35663 651 aaPredicted RBP17.09■□□□□ 0.33
VHL-203ENST00000477538 PLA2G4AP47712 749 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 GPR15P49685 360 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 RGS7P49802 495 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 PDCLQ13371 301 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 SLC18A3Q16572 532 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 DDR2Q16832 855 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 SDHAF4Q5VUM1 108 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 LLGL2Q6P1M3 1020 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 PIGZQ86VD9 579 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 WDTC1Q8N5D0 677 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 CPA5Q8WXQ8 436 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 PNPLA8Q9NP80 782 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 DPP7Q9UHL4 492 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 CYTH4Q9UIA0 394 aa17.09■□□□□ 0.33
VHL-203ENST00000477538 TMCO5BA8MYB1 307 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 HHLA1C9JL84 531 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 GZMAP12544 262 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 ATF6P18850 670 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 GTF2F1P35269 517 aaKnown RBP eCLIP17.08■□□□□ 0.32
VHL-203ENST00000477538 NSFP46459 744 aaKnown RBP17.08■□□□□ 0.32
VHL-203ENST00000477538 ALDH1A3P47895 512 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 CCZ1BP86790 482 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 CCZ1P86791 482 aaPredicted RBP17.08■□□□□ 0.32
VHL-203ENST00000477538 CENPCQ03188 943 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 GFPT1Q06210 699 aaPredicted RBP17.08■□□□□ 0.32
VHL-203ENST00000477538 TWF1Q12792 350 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 HYAL1Q12794 435 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 PLD1Q13393 1074 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 MTF1Q14872 753 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 PMF1Q6P1K2 205 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 ELMSAN1Q6PJG2 1045 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 RAD9BQ6WBX8 426 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 Q7L0L9 218 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 STK32AQ8WU08 396 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 HDAC7Q8WUI4 952 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 UBXN6Q9BZV1 441 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 IGFLR1Q9H665 355 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 ST7Q9NRC1 585 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 TAS2R14Q9NYV8 317 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 NAGPAQ9UK23 515 aa17.08■□□□□ 0.32
VHL-203ENST00000477538 EPHB3P54753 998 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 KCNC3Q14003 757 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 PTPN20Q4JDL3 420 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 PPM1LQ5SGD2 360 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 CCDC122Q5T0U0 273 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 ACAD10Q6JQN1 1059 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 PPP1R2P3Q6NXS1 205 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 ALKBH5Q6P6C2 394 aaKnown RBP17.07■□□□□ 0.32
VHL-203ENST00000477538 RTL10Q7L3V2 364 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 GPRIN1Q7Z2K8 1008 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 ERICH1Q86X53 443 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 MSANTD4Q8NCY6 345 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 STKLD1Q8NE28 680 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 GPR152Q8TDT2 470 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 IPO4Q8TEX9 1081 aaKnown RBP17.07■□□□□ 0.32
VHL-203ENST00000477538 KCTD13Q8WZ19 329 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 PPP1R13BQ96KQ4 1090 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 SPATA17Q96L03 361 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 HSFY1Q96LI6 401 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 CEP295NLQ96MC4 621 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 CPXM1Q96SM3 734 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 SLC4A5Q9BY07 1137 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 LRRC4Q9HBW1 653 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 CYLDQ9NQC7 956 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 NENFQ9UMX5 172 aa17.07■□□□□ 0.32
VHL-203ENST00000477538 EPN1Q9Y6I3 576 aaPredicted RBP17.07■□□□□ 0.32
VHL-203ENST00000477538 HELZP42694 1942 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms