RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
CLDN11-204ENST00000477531 DUS2Q9NX74 493 aaKnown RBP16.74■□□□□ 0.27
CLDN11-204ENST00000477531 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 RAB23Q9ULC3 237 aa16.74■□□□□ 0.27
CLDN11-204ENST00000477531 GVINP1Q7Z2Y8 2422 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 IKBKBO14920 756 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 ZNF202O95125 648 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 ABL1P00519 1130 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 PRR29P0C7W0 189 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 KRT13P13646 458 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 CDH8P55286 799 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 NOP14P78316 857 aaKnown RBP16.73■□□□□ 0.27
CLDN11-204ENST00000477531 DPYDQ12882 1025 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 NR1H3Q13133 447 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 SCARA5Q6ZMJ2 495 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 SUMF1Q8NBK3 374 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 OSCP1Q8WVF1 389 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 TAF4BQ92750 862 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 NELL1Q92832 810 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 ATP2A3Q93084 1043 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 IMPG2Q9BZV3 1241 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 DPEP3Q9H4B8 488 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 SMYD3Q9H7B4 428 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 HPS4Q9NQG7 708 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 TRAF3IP3Q9Y228 551 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 FANCMQ8IYD8 2048 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 WDR87Q6ZQQ6 2873 aa16.73■□□□□ 0.27
CLDN11-204ENST00000477531 DENND4CQ5VZ89 1909 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 C2orf78A6NCI8 922 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 MAPK13O15264 365 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 LILRB5O75023 590 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 RTN3O95197 1032 aaPredicted RBP16.72■□□□□ 0.27
CLDN11-204ENST00000477531 ARSAP15289 507 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 NR2F2P24468 414 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 PIK3CAP42336 1068 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 VAMP7P51809 220 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 SATB1Q01826 763 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 CCINQ13939 588 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 ZNF77Q15935 545 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 NFIL3Q16649 462 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 ZACNQ401N2 412 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 INTS8Q75QN2 995 aaKnown RBP16.72■□□□□ 0.27
CLDN11-204ENST00000477531 NUP93Q8N1F7 819 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 GUF1Q8N442 669 aaKnown RBP16.72■□□□□ 0.27
CLDN11-204ENST00000477531 CCDC150Q8NCX0 1101 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 SH3RF2Q8TEC5 729 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 TTLL2Q9BWV7 592 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 B3GNT5Q9BYG0 378 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 ZNF518BQ9C0D4 1074 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 DNAI2Q9GZS0 605 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 EPC1Q9H2F5 836 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 GDPD2Q9HCC8 539 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 GCNT4Q9P109 453 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 ARHGAP26Q9UNA1 814 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 SMG5Q9UPR3 1016 aaKnown RBP16.72■□□□□ 0.27
CLDN11-204ENST00000477531 MAPK8IP1Q9UQF2 711 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
CLDN11-204ENST00000477531 CLDN5O00501 218 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 ATG13O75143 517 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 VNN1O95497 513 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 YWHAQP27348 245 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 PSMC2P35998 433 aaKnown RBP16.71■□□□□ 0.27
CLDN11-204ENST00000477531 RAP1GAPP47736 663 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 USP46P62068 366 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 DLG4P78352 724 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 NUCB2P80303 420 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.27
CLDN11-204ENST00000477531 TAF10Q12962 218 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 USP4Q13107 963 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 GAS6Q14393 721 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 Q6ZS52 159 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 SV2AQ7L0J3 742 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 FAM186BQ8IYM0 893 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 KIAA2013Q8IYS2 634 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 PDZD8Q8NEN9 1154 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 SMARCD1Q96GM5 515 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 SLC22A12Q96S37 553 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 GOLPH3LQ9H4A5 285 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 ECT2Q9H8V3 914 aa16.71■□□□□ 0.27
CLDN11-204ENST00000477531 ZNF840PA6NDX5 716 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 TRDMT1O14717 391 aaKnown RBP16.7■□□□□ 0.26
CLDN11-204ENST00000477531 PAPSS2O95340 614 aaPredicted RBP16.7■□□□□ 0.26
CLDN11-204ENST00000477531 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 TDGF1P13385 188 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 TCF3P15923 654 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 DRD1P21728 446 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 ID4P47928 161 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 ADAM9Q13443 819 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 TMEM196Q5HYL7 178 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 GPR161Q8N6U8 529 aaKnown RBP16.7■□□□□ 0.26
CLDN11-204ENST00000477531 FBXO32Q969P5 355 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 P2RY13Q9BPV8 354 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 DMAP1Q9NPF5 467 aaPredicted RBP16.7■□□□□ 0.26
CLDN11-204ENST00000477531 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 GMEB2Q9UKD1 530 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 WNT6Q9Y6F9 365 aa16.7■□□□□ 0.26
CLDN11-204ENST00000477531 NFATC1O95644 943 aa16.69■□□□□ 0.26
CLDN11-204ENST00000477531 ASS1P00966 412 aaKnown RBP16.69■□□□□ 0.26
CLDN11-204ENST00000477531 CNR2P34972 360 aa16.69■□□□□ 0.26
CLDN11-204ENST00000477531 GJA4P35212 333 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms