RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 UBA7P41226 1012 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 TAF6P49848 677 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 LIMK1P53667 647 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 POU5F1Q01860 360 aaKnown RBP11.24□□□□□ -0.61
CALD1-217ENST00000475772 CEP68Q76N32 757 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 THEM5Q8N1Q8 247 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 C2orf15Q8WU43 125 aaKnown RBP11.24□□□□□ -0.61
CALD1-217ENST00000475772 GAB3Q8WWW8 586 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 CALML4Q96GE6 196 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 FAM84AQ96KN4 292 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 SLC22A12Q96S37 553 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 SMOC1Q9H4F8 434 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 ABI2Q9NYB9 513 aaPredicted RBP11.24□□□□□ -0.61
CALD1-217ENST00000475772 AGO2Q9UKV8 859 aaKnown RBP11.24□□□□□ -0.61
CALD1-217ENST00000475772 DSEQ9UL01 958 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 DOLKQ9UPQ8 538 aa11.24□□□□□ -0.61
CALD1-217ENST00000475772 FRYQ5TBA9 3013 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 ASCC3Q8N3C0 2202 aaKnown RBP11.23□□□□□ -0.61
CALD1-217ENST00000475772 CCDC163A0A0D9SF12 145 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 HCRTO43612 131 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 EPN2O95208 641 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 NEFLP07196 543 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 BMP2P12643 396 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 SMARCB1Q12824 385 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 VEPH1Q14D04 833 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 DDR2Q16832 855 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 CCDC142Q17RM4 750 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 N4BP2L1Q5TBK1 243 aaPredicted RBP11.23□□□□□ -0.61
CALD1-217ENST00000475772 ERICH6BQ5W0A0 696 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 OSTM1Q86WC4 334 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 METTL23Q86XA0 190 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 PLPP7Q8NBV4 271 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 GLMNQ92990 594 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 EPSTI1Q96J88 318 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 LOXL4Q96JB6 756 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 ZC3H10Q96K80 434 aaKnown RBP11.23□□□□□ -0.61
CALD1-217ENST00000475772 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 CYP2S1Q96SQ9 504 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 PI4K2AQ9BTU6 479 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 ZHX3Q9H4I2 956 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 TDP1Q9NUW8 608 aa11.23□□□□□ -0.61
CALD1-217ENST00000475772 THG1LQ9NWX6 298 aaKnown RBP11.23□□□□□ -0.61
CALD1-217ENST00000475772 SPINT1O43278 529 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 RPP40O75818 363 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 CYP2F1P24903 491 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 PMLP29590 882 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 GJA4P35212 333 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 LONP1P36776 959 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 PTGIRP43119 386 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 ZXDBP98169 803 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 RELBQ01201 579 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 SF3A1Q15459 793 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 MAP7D1Q3KQU3 841 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 PLK5Q496M5 336 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 DYMQ7RTS9 669 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 CACNA2D4Q7Z3S7 1137 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 MON1AQ86VX9 555 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 SFR1Q86XK3 245 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 DCP1BQ8IZD4 617 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 PDCL2Q8N4E4 241 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 C1orf127Q8N9H9 656 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 CHD6Q8TD26 2715 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 LARP4BQ92615 738 aaKnown RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 DNAJC19Q96DA6 116 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 MYRFLQ96LU7 910 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 DUSP15Q9H1R2 295 aaPredicted RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 ECT2Q9H8V3 914 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 ZMYM5Q9UJ78 669 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 GTF3C4Q9UKN8 822 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 L1RE1Q9UN81 338 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 MAGED2Q9UNF1 606 aaPredicted RBP11.22□□□□□ -0.61
CALD1-217ENST00000475772 PCDHB5Q9Y5E4 795 aa11.22□□□□□ -0.61
CALD1-217ENST00000475772 HELZP42694 1942 aaKnown RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 ASPMQ8IZT6 3477 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 MYMKA6NI61 221 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 SOBPA7XYQ1 873 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 H3BQV1 296 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 GABRDO14764 452 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 DCLK1O15075 740 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 NOL4O94818 638 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 CSH1P0DML2 217 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 CSH2P0DML3 217 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 ACAT1P24752 427 aaKnown RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 DDX6P26196 483 aaKnown RBP eCLIP11.21□□□□□ -0.61
CALD1-217ENST00000475772 POLR2BP30876 1174 aaKnown RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 AVPR1AP37288 418 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 GRSF1Q12849 480 aaKnown RBP eCLIP11.21□□□□□ -0.61
CALD1-217ENST00000475772 ZNF268Q14587 947 aaPredicted RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 PTPAQ15257 358 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 RABEP1Q15276 862 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 ZNF77Q15935 545 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 TAF12Q16514 161 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 ST3GAL2Q16842 350 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 AASDHQ4L235 1098 aaPredicted RBP11.21□□□□□ -0.61
CALD1-217ENST00000475772 NT5DC4Q86YG4 428 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 CAMKK1Q8N5S9 505 aa11.21□□□□□ -0.61
CALD1-217ENST00000475772 LEO1Q8WVC0 666 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms