RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 TMEM174Q8WUU8 243 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 KCNK16Q96T55 309 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 CGRRF1Q99675 332 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 P2RY13Q9BPV8 354 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TTLL2Q9BWV7 592 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 B3GNT5Q9BYG0 378 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 ZNF518BQ9C0D4 1074 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 SDCBP2Q9H190 292 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 RXFP3Q9NSD7 469 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 DMAC2Q9NW81 257 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 DUS2Q9NX74 493 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 UXTQ9UBK9 157 aaPredicted RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 SERTAD1Q9UHV2 236 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 ARHGAP26Q9UNA1 814 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TSC2P49815 1807 aa7.5□□□□□ -1.21
HDAC3-207ENST00000475549 TRAV19A0A0A6YYK7 116 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 LRRIQ3A6PVS8 624 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 K7EQS6 105 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 CLDN5O00501 218 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SCAMP3O14828 347 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 GDF9O60383 454 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 RNF40O75150 1001 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 STAU1O95793 577 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 OLFM2O95897 454 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 CKMP06732 381 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 USP17L7P0C7H9 530 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 TCF3P15923 654 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 CNR2P34972 360 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 OPRD1P41143 372 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 RAP1GAPP47736 663 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SNRPFP62306 86 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 NOP14P78316 857 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SLC7A9P82251 487 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 LMNB2Q03252 620 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 TAF10Q12962 218 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 USP4Q13107 963 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 C1orf220Q5T0J3 134 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 CC2D1AQ6P1N0 951 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 VSTM1Q6UX27 236 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 C4orf50Q6ZRC1 276 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 DENND5BQ6ZUT9 1274 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 HS2ST1Q7LGA3 356 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 WDR5BQ86VZ2 330 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 GPR161Q8N6U8 529 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 TTC16Q8NEE8 873 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SCAMP5Q8TAC9 235 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 PARD3BQ8TEW8 1205 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 C8orf48Q96LL4 319 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 FNBP1Q96RU3 617 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 KCTD10Q9H3F6 313 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SMYD3Q9H7B4 428 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 KIF9Q9HAQ2 790 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 MAGEF1Q9HAY2 307 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 SEMA4GQ9NTN9 838 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 NXF1Q9UBU9 619 aaKnown RBP7.49□□□□□ -1.21
HDAC3-207ENST00000475549 USP18Q9UMW8 372 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 HPSEQ9Y251 543 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 ZFHX4Q86UP3 3567 aa7.49□□□□□ -1.21
HDAC3-207ENST00000475549 PATJQ8NI35 1801 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 A0A1B0GVL5 298 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 PRR5-ARHGAP8B1AHC4 643 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 LEFTY2O00292 366 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 TNFRSF10BO14763 440 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 DCLK1O15075 740 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 EXOC3O60645 756 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 BEST1O76090 585 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 OAS1P00973 400 aaKnown RBP7.48□□□□□ -1.21
HDAC3-207ENST00000475549 DRD1P21728 446 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 SLC6A11P48066 632 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 ARHGAP8P85298 464 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 ORC1Q13415 861 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 MAPRE1Q15691 268 aaKnown RBP7.48□□□□□ -1.21
HDAC3-207ENST00000475549 CCDC6Q16204 474 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 CSRP2Q16527 193 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 KMT5BQ4FZB7 885 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 ATL3Q6DD88 541 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 RHBDF2Q6PJF5 856 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 FILIP1Q7Z7B0 1213 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 KBTBD6Q86V97 674 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 C12orf40Q86WS4 652 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 FSIP1Q8NA03 581 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 ZMIZ2Q8NF64 920 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 RPLP0P6Q8NHW5 317 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 GAB3Q8WWW8 586 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 SECISBP2LQ93073 1101 aaKnown RBP7.48□□□□□ -1.21
HDAC3-207ENST00000475549 WBP2Q969T9 261 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 ZFRQ96KR1 1074 aaKnown RBP7.48□□□□□ -1.21
HDAC3-207ENST00000475549 CEP295NLQ96MC4 621 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 SNX25Q9H3E2 840 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 VRTNQ9H8Y1 702 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 SMPD4Q9NXE4 827 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 FAM13BQ9NYF5 915 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 IL37Q9NZH6 218 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 TRPM5Q9NZQ8 1165 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 HMGXB4Q9UGU5 601 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 CHORDC1Q9UHD1 332 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-207ENST00000475549 GMEB2Q9UKD1 530 aa7.48□□□□□ -1.21
HDAC3-207ENST00000475549 CFAP45Q9UL16 551 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms