RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 LMAN2Q12907 356 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 MYO1EQ12965 1108 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 COL9A2Q14055 689 aaPredicted RBP21.89■■□□□ 1.09
VPS36-203ENST00000475375 TRIM61Q5EBN2 209 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 L1TD1Q5T7N2 865 aaKnown RBP21.89■■□□□ 1.09
VPS36-203ENST00000475375 KIAA1211LQ6NV74 962 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 FILIP1Q7Z7B0 1213 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 ALLCQ8N6M5 410 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 MYLPFQ96A32 169 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 SYT15Q9BQS2 421 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 MTMR12Q9C0I1 747 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 PDE11AQ9HCR9 933 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 SEL1LQ9UBV2 794 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 WASF3Q9UPY6 502 aa21.89■■□□□ 1.09
VPS36-203ENST00000475375 ZFYVE26Q68DK2 2539 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 GABRDO14764 452 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 SCAMP3O14828 347 aaKnown RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 PPP1R37O75864 691 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 KLF8O95600 359 aaPredicted RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 ABL1P00519 1130 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 GAP43P17677 238 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 BDNFP23560 247 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 MRPS21P82921 87 aaKnown RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 CYP27A1Q02318 531 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 SOWAHAQ2M3V2 549 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 LMBRD2Q68DH5 695 aaPredicted RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 TMEFF1Q8IYR6 380 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 TXNDC5Q8NBS9 432 aaKnown RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 WHAMMQ8TF30 809 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 EPSTI1Q96J88 318 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 SLC32A1Q9H598 525 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 SMPD4Q9NXE4 827 aa21.88■■□□□ 1.09
VPS36-203ENST00000475375 EVLQ9UI08 416 aaPredicted RBP21.88■■□□□ 1.09
VPS36-203ENST00000475375 CYP17A1P05093 508 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 TIE1P35590 1138 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 ZXDBP98169 803 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 SF3A1Q15459 793 aaKnown RBP21.87■■□□□ 1.09
VPS36-203ENST00000475375 FAM171BQ6P995 826 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 VSTM1Q6UX27 236 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 TMEM92Q6UXU6 159 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 DENND5BQ6ZUT9 1274 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 PGBD3Q8N328 593 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 CXorf38Q8TB03 319 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 ANKRD36BP1Q96IX9 119 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 TMX3Q96JJ7 454 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 SPATA17Q96L03 361 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 PNKPQ96T60 521 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 PCIF1Q9H4Z3 704 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 POLMQ9NP87 494 aaPredicted RBP21.87■■□□□ 1.09
VPS36-203ENST00000475375 SIX4Q9UIU6 781 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 CDH9Q9ULB4 789 aa21.87■■□□□ 1.09
VPS36-203ENST00000475375 SLC9A3R1O14745 358 aaPredicted RBP21.86■■□□□ 1.09
VPS36-203ENST00000475375 APODP05090 189 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 PDGFRBP09619 1106 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 PFKLP17858 780 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 GARTP22102 1010 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 LMO2P25791 158 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 P2RY2P41231 377 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 SLC6A11P48066 632 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 USP46P62068 366 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 RESTQ13127 1097 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 DHCR24Q15392 516 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 MAPRE1Q15691 268 aaKnown RBP21.86■■□□□ 1.09
VPS36-203ENST00000475375 GAB4Q2WGN9 574 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 SFTPA1Q8IWL2 248 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 OLIG1Q8TAK6 271 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 HMGB4Q8WW32 186 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 ZCCHC14Q8WYQ9 949 aaKnown RBP21.86■■□□□ 1.09
VPS36-203ENST00000475375 HPDLQ96IR7 371 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 CBWD1Q9BRT8 395 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 STRA6Q9BX79 667 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 TMEM121BQ9BXQ6 578 aaPredicted RBP21.86■■□□□ 1.09
VPS36-203ENST00000475375 EHD2Q9NZN4 543 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 STK17AQ9UEE5 414 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 CCDC39Q9UFE4 941 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 PCDHB13Q9Y5F0 798 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 CPQQ9Y646 472 aa21.86■■□□□ 1.09
VPS36-203ENST00000475375 AKAP13Q12802 2813 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 ATXN2Q99700 1313 aaKnown RBP21.85■■□□□ 1.09
VPS36-203ENST00000475375 ANAPC1Q9H1A4 1944 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 SGK1O00141 431 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 TNFRSF10BO14763 440 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 HYAL3O43820 417 aaPredicted RBP21.85■■□□□ 1.09
VPS36-203ENST00000475375 CFIP05156 583 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 IDEP14735 1019 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 HNRNPLP14866 589 aaKnown RBP eCLIP21.85■■□□□ 1.09
VPS36-203ENST00000475375 PTGER3P43115 390 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 KDSRQ06136 332 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 RABEP1Q15276 862 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 EOGTQ5NDL2 527 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 LARP1BQ659C4 914 aaKnown RBP21.85■■□□□ 1.09
VPS36-203ENST00000475375 USP49Q70CQ1 688 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 SV2BQ7L1I2 683 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 SYT12Q8IV01 421 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 FRMD1Q8N878 549 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 IL17RCQ8NAC3 791 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 GATA6Q92908 595 aa21.85■■□□□ 1.09
VPS36-203ENST00000475375 MMS19Q96T76 1030 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms