RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PLEKHA7Q6IQ23 1121 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ZFP1Q6P2D0 407 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 BORAQ6PGQ7 559 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PADI6Q6TGC4 694 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 EP400NLQ6ZTU2 488 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ANO5Q75V66 913 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MYLK4Q86YV6 388 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CRLF3Q8IUI8 442 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 WDR75Q8IWA0 830 aaKnown RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PALM2Q8IXS6 379 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 KLHL23Q8NBE8 558 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ATP2A3Q93084 1043 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 DGCR14Q96DF8 476 aaKnown RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CMTM5Q96DZ9 223 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 DYDC2Q96IM9 177 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MFSD14AQ96MC6 490 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 FBXL18Q96ME1 805 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CRAMP1Q96RY5 1269 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SERPINI1Q99574 410 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ZNF577Q9BSK1 485 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 GCOM2Q9BZD3 368 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 IMPG2Q9BZV3 1241 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 TMEM117Q9H0C3 514 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 VPS33BQ9H267 617 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CPVLQ9H3G5 476 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 FAM124BQ9H5Z6 455 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ARHGEF10LQ9HCE6 1279 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 NPHS2Q9NP85 383 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CHST7Q9NS84 486 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 HEY2Q9UBP5 337 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PADI4Q9UM07 663 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SOX13Q9UN79 622 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PHF24Q9UPV7 400 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PPME1Q9Y570 386 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 LRRC37AA6NMS7 1700 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 FAM86B1E9PN63 330 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 POC1B-GALNT4F8VUJ3 575 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 H0Y3Z8 333 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 H0YJX3 145 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SLC22A2O15244 555 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CYP26A1O43174 497 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 H2AFYO75367 372 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 AP1G2O75843 785 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CBX6O95503 412 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 VIL1P09327 827 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 FAM86B2P0C5J1 330 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 EEF2P13639 858 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ANPEPP15144 967 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 AOC1P19801 751 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 QARSP47897 775 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 GCLMP48507 274 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 STAT2P52630 851 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CYP4A11Q02928 519 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 EVX2Q03828 476 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CXCL9Q07325 125 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 GPS1Q13098 491 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 IKQ13123 557 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 LSAMPQ13449 338 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SNX1Q13596 522 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CYLC2Q14093 348 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 GRM2Q14416 872 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CRY2Q49AN0 593 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 KHDC1Q4VXA5 237 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ACSBG2Q5FVE4 666 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 FSCBQ5H9T9 825 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 TMEM63BQ5T3F8 832 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 TTC39BQ5VTQ0 682 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SLFN12LQ6IEE8 588 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 MON1BQ7L1V2 547 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 MIER3Q7Z3K6 550 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 HAUS6Q7Z4H7 955 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 SETD3Q86TU7 594 aaPredicted RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 LRRC6Q86X45 466 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 IFNL1Q8IU54 200 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 MAP4K3Q8IVH8 894 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ARHGEF19Q8IW93 802 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 C4orf19Q8IY42 314 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ZBED8Q8IZ13 594 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ZDHHC14Q8IZN3 488 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 KIRREL3Q8IZU9 778 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ANKLE1Q8NAG6 615 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 MCPH1Q8NEM0 835 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 FEZF2Q8TBJ5 459 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 HELQQ8TDG4 1101 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 ACMSDQ8TDX5 336 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 FNIP1Q8TF40 1166 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 DDX1Q92499 740 aaKnown RBP8.38□□□□□ -1.07
CCDC93-208ENST00000474546 HAUS1Q96CS2 278 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 CDCA5Q96FF9 252 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 C9orf72Q96LT7 481 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 KCNK16Q96T55 309 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 PCDHB18PQ96TA0 734 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 NDNQ99608 321 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 LXNQ9BS40 222 aa8.38□□□□□ -1.07
CCDC93-208ENST00000474546 HAUS8Q9BT25 410 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms