RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 SH3RF2Q8TEC5 729 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 MYRFLQ96LU7 910 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 MED10Q9BTT4 135 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 TRPM5Q9NZQ8 1165 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 NME7Q9Y5B8 376 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 MED19A0JLT2 244 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 SCAMP3O14828 347 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 TRIM66O15016 1216 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 RNF40O75150 1001 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 GJA4P35212 333 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 GALK1P51570 392 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 CACNA2D1P54289 1103 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 AMPD2Q01433 879 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 PDGFRLQ15198 375 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF699Q32M78 642 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 KMT5BQ4FZB7 885 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 TMEM196Q5HYL7 178 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 LAIR1Q6GTX8 287 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 LIMS2Q7Z4I7 341 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 MYCBPAPQ8TBZ2 947 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 OSCP1Q8WVF1 389 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 ATP2A3Q93084 1043 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 SYAP1Q96A49 352 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 PAGE5Q96GU1 130 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 P2RY13Q9BPV8 354 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 LINC00597Q9H2U6 94 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 ECT2Q9H8V3 914 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■■■■■ 120.7
SMPD4-217ENST00000473720 SMPD4Q9NXE4 827 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 CDV3Q9UKY7 258 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 SLC8A2Q9UPR5 921 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
SMPD4-217ENST00000473720 GPR179Q6PRD1 2367 aa12.74□□□□□ -0.37
SMPD4-217ENST00000473720 ADAMTS9Q9P2N4 1935 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 LRRIQ3A6PVS8 624 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 TRDMT1O14717 391 aaKnown RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 ACTN4O43707 911 aaKnown RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 KLRC4O43908 158 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SLFN14P0C7P3 912 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 CCDC192P0DO97 292 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 PFKFB1P16118 471 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SNRPFP62306 86 aaKnown RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 STK4Q13043 487 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 USP4Q13107 963 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 BMT2Q1RMZ1 405 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 CEP135Q66GS9 1140 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 ATL3Q6DD88 541 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SYNPOQ8N3V7 929 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 B3GALNT2Q8NCR0 500 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 RPLP0P6Q8NHW5 317 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SPATA17Q96L03 361 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SPATA32Q96LK8 384 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 HHIPQ96QV1 700 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 B3GNT5Q9BYG0 378 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF518BQ9C0D4 1074 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 GCNT4Q9P109 453 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 CGNQ9P2M7 1197 aaKnown RBP12.73□□□□□ -0.37
SMPD4-217ENST00000473720 RCOR1Q9UKL0 485 aa12.73□□□□□ -0.37
SMPD4-217ENST00000473720 SOBPA7XYQ1 873 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 LEFTY2O00292 366 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 AXIN1O15169 862 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 ATG13O75143 517 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 TACC1O75410 805 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 MBL2P11226 248 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-217ENST00000473720 SEC13P55735 322 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 DLG4P78352 724 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 ZXDBP98169 803 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 TAF10Q12962 218 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 NR1H3Q13133 447 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 ORC1Q13415 861 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 CCDC6Q16204 474 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 EML3Q32P44 896 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF667Q5HYK9 610 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 C12orf56Q8IXR9 622 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 FAM160A2Q8N612 972 aaPredicted RBP12.72□□□□□ -0.37
SMPD4-217ENST00000473720 PARD3BQ8TEW8 1205 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 CD101Q93033 1021 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 EXOC4Q96A65 974 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 RNF38Q9H0F5 515 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 TMEM30AQ9NV96 361 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 CPQQ9Y646 472 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
SMPD4-217ENST00000473720 PI4KAP42356 2102 aa12.71□□□□□ -0.37
SMPD4-217ENST00000473720 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.37
SMPD4-217ENST00000473720 PAPSS2O95340 614 aaPredicted RBP12.71□□□□□ -0.37
SMPD4-217ENST00000473720 RPN1P04843 607 aaKnown RBP12.71□□□□□ -0.37
SMPD4-217ENST00000473720 RETP07949 1114 aa12.71□□□□□ -0.37
SMPD4-217ENST00000473720 PRR29P0C7W0 189 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms