RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 CD6P30203 668 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 NTSR1P30989 418 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 ADD1P35611 737 aaKnown RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 TNFSF9P41273 254 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 GRIA2P42262 883 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 WASP42768 502 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 NAMPTP43490 491 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 SLC6A11P48066 632 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 PDE6CP51160 858 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 EFNA5P52803 228 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 BNC1Q01954 994 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 HDAC1Q13547 482 aaPredicted RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 KCNB1Q14721 858 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 PPP2R5AQ15172 486 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 TEAD4Q15561 434 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 GAB4Q2WGN9 574 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 DCAF12L1Q5VU92 463 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 KIAA1614Q5VZ46 1190 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 SDE2Q6IQ49 451 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 KIAA1324Q6UXG2 1013 aaKnown RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 NUDT18Q6ZVK8 323 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 DHX40Q8IX18 779 aaKnown RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 SPPL2BQ8TCT7 592 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 KCNV2Q8TDN2 545 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 OXER1Q8TDS5 423 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 PIGOQ8TEQ8 1089 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 C2orf15Q8WU43 125 aaKnown RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 ERLEC1Q96DZ1 483 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 ZFRQ96KR1 1074 aaKnown RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 SLC22A12Q96S37 553 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 CYP2S1Q96SQ9 504 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 GPR174Q9BXC1 333 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 CDT1Q9H211 546 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 LINC00597Q9H2U6 94 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 KCNMB3Q9NPA1 279 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 CD93Q9NPY3 652 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 ABI2Q9NYB9 513 aaPredicted RBP6.33□□□□□ -1.4
SIK3-208ENST00000472648 PCDHA4Q9UN74 947 aa6.33□□□□□ -1.4
SIK3-208ENST00000472648 E2F8A0AVK6 867 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 TBC1D3BA6NDS4 549 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 SLC9A3R1O14745 358 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 SLC27A2O14975 620 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 SGSM2O43147 1006 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 PCDHGA12O60330 932 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 LYPLA2O95372 231 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 BAG4O95429 457 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 LDOC1O95751 146 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 ADH1CP00326 375 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 HAPLN1P10915 354 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 ADH5P11766 374 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 TCF3P15923 654 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 GCFC2P16383 781 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 HMGA1P17096 107 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 CHMLP26374 656 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 AARSP49588 968 aaKnown RBP eCLIP6.32□□□□□ -1.4
SIK3-208ENST00000472648 AFF3P51826 1226 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 RCAN1P53805 252 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 NFKB2Q00653 900 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 MESP2Q0VG99 397 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 ZC2HC1CQ53FD0 456 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 NT5DC1Q5TFE4 455 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 FBXL19Q6PCT2 694 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 FILIP1Q7Z7B0 1213 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 C12orf40Q86WS4 652 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 POTEDQ86YR6 584 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 BLIDQ8IZY5 108 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 ARL14EPQ8N8R7 260 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 FSIP1Q8NA03 581 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 STKLD1Q8NE28 680 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 CADM4Q8NFZ8 388 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 OR10T2Q8NGX3 314 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 IPO4Q8TEX9 1081 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 SNRNP27Q8WVK2 155 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 SNX19Q92543 992 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 TSC1Q92574 1164 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 IGSF8Q969P0 613 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 TOE1Q96GM8 510 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 CNDP2Q96KP4 475 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 IFT74Q96LB3 600 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 TCEANC2Q96MN5 208 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 ZNF578Q96N58 590 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 EIF2AK1Q9BQI3 630 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 TCHPQ9BT92 498 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 KIFC3Q9BVG8 833 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 SLC26A6Q9BXS9 759 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 RNF26Q9BY78 433 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 DPH1Q9BZG8 443 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 SH3GLB2Q9NR46 395 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 EIF2B4Q9UI10 523 aaKnown RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 TNFSF13BQ9Y275 285 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.32□□□□□ -1.4
SIK3-208ENST00000472648 KIF26BQ2KJY2 2108 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 CENPEQ02224 2701 aa6.32□□□□□ -1.4
SIK3-208ENST00000472648 ARID1BQ8NFD5 2236 aaPredicted RBP6.31□□□□□ -1.4
SIK3-208ENST00000472648 ZFC3H1O60293 1989 aaKnown RBP6.31□□□□□ -1.4
SIK3-208ENST00000472648 PHLPP2Q6ZVD8 1323 aa6.31□□□□□ -1.4
SIK3-208ENST00000472648 A0A0A0MRY4 1105 aa6.31□□□□□ -1.4
SIK3-208ENST00000472648 A0A1W2PQF6 199 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms