RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 CLEC16AQ2KHT3 1053 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CFAP221Q4G0U5 840 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 HABP4Q5JVS0 413 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 HGSNATQ68CP4 663 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ACAD10Q6JQN1 1059 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ALKBH5Q6P6C2 394 aaKnown RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ADGRD2Q7Z7M1 963 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 KIAA1328Q86T90 577 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 TTC30AQ86WT1 665 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CCDC170Q8IYT3 715 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SLC30A5Q8TAD4 765 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SLC7A14Q8TBB6 771 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 GPR152Q8TDT2 470 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PPP1R13BQ96KQ4 1090 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ZNF512Q96ME7 567 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ZNF830Q96NB3 372 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 CDCA3Q99618 268 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 ZSWIM1Q9BR11 485 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 PLEKHA4Q9H4M7 779 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 MAN1C1Q9NR34 630 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 SPTLC3Q9NUV7 552 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 EHD2Q9NZN4 543 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 LMCD1Q9NZU5 365 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 EPN1Q9Y6I3 576 aaPredicted RBP11.12□□□□□ -0.63
UBE2F-220ENST00000472479 GBF1Q92538 1859 aa11.12□□□□□ -0.63
UBE2F-220ENST00000472479 KIAA1671Q9BY89 1806 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 DDX3XO00571 662 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE2F-220ENST00000472479 XPO1O14980 1071 aaKnown RBP11.11□□□□□ -0.63
UBE2F-220ENST00000472479 RTN2O75298 545 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 SEC24AO95486 1093 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 ABL1P00519 1130 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 FTLP02792 175 aaPredicted RBP11.11□□□□□ -0.63
UBE2F-220ENST00000472479 EPCAMP16422 314 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 ABCB4P21439 1286 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 GPD2P43304 727 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 MAGEA1P43355 309 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 GPR15P49685 360 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 KRT83P78385 493 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 DUSP6Q16828 381 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 TCEAL5Q5H9L2 206 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 OR6B2Q6IFH4 312 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 CLEC20AQ6ZU45 233 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 PAQR9Q6ZVX9 377 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 PHLDB2Q86SQ0 1253 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 ITIH5Q86UX2 942 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 PIGZQ86VD9 579 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 TCEAL8Q8IYN2 117 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 NUP93Q8N1F7 819 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 TXLNBQ8N3L3 684 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 DEFB123Q8N688 67 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 TTC9BQ8N6N2 239 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 DDX1Q92499 740 aaKnown RBP11.11□□□□□ -0.63
UBE2F-220ENST00000472479 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 CASP10Q92851 521 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 C18orf8Q96DM3 657 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 C8orf48Q96LL4 319 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 PCDHB18PQ96TA0 734 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 PKMYT1Q99640 499 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 SMOQ99835 787 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 ADAM22Q9P0K1 906 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 YIPF1Q9Y548 306 aa11.11□□□□□ -0.63
UBE2F-220ENST00000472479 NLRC5Q86WI3 1866 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 A0A087X0T9 212 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 SLC38A8A6NNN8 435 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 CCL16O15467 120 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 ARHGAP6O43182 974 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 XYLBO75191 536 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 BEST1O76090 585 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 RTN3O95197 1032 aaPredicted RBP11.1□□□□□ -0.63
UBE2F-220ENST00000472479 CALB1P05937 261 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 FAM228BP0C875 321 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 CSH1P0DML2 217 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 CSH2P0DML3 217 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 TKTL1P51854 596 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 NAP1L1P55209 391 aaKnown RBP11.1□□□□□ -0.63
UBE2F-220ENST00000472479 SLC18A3Q16572 532 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 CTNNBL1Q8WYA6 563 aaPredicted RBP11.1□□□□□ -0.63
UBE2F-220ENST00000472479 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 HSFY1Q96LI6 401 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 C11orf70Q9BRQ4 267 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 MYO1AQ9UBC5 1043 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 HSFX1Q9UBD0 423 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 FBXW11Q9UKB1 542 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 INSL5Q9Y5Q6 135 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 HCFC2Q9Y5Z7 792 aa11.1□□□□□ -0.63
UBE2F-220ENST00000472479 ANKRD62A6NC57 917 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 GOLGA8SH3BPF8 625 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 TULP2O00295 520 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 GALR2O43603 387 aaPredicted RBP11.09□□□□□ -0.63
UBE2F-220ENST00000472479 NCK2O43639 380 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 NDUFA10O95299 355 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 CYP1A1P04798 512 aaPredicted RBP11.09□□□□□ -0.63
UBE2F-220ENST00000472479 H2AFZP0C0S5 128 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 GZMAP12544 262 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 FOSL2P15408 326 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 YWHAQP27348 245 aa11.09□□□□□ -0.63
UBE2F-220ENST00000472479 GTF2F1P35269 517 aaKnown RBP eCLIP11.09□□□□□ -0.63
UBE2F-220ENST00000472479 CACNA2D1P54289 1103 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms