RNA–Protein interactions for RNA: ENST00000471014.1

CTNNB1-212, Transcript of catenin beta 1, humanhuman

TSL 3

Gene CTNNB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-212ENST00000471014 TFIP11Q9UBB9 837 aaKnown RBP13.71□□□□□ -0.21
CTNNB1-212ENST00000471014 F8VP50 259 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 LEFTY2O00292 366 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 STX6O43752 255 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 NFATC1O95644 943 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 APBB3O95704 486 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 WARSP23381 471 aaKnown RBP13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 HOXD13P35453 343 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 ELF2Q15723 593 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 STPG1Q5TH74 334 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 VSTM1Q6UX27 236 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 SYT13Q7L8C5 426 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 DPH6Q7L8W6 267 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 WDR49Q8IV35 697 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 LOXL4Q96JB6 756 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 FNBP1Q96RU3 617 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 TRIM9Q9C026 710 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 DPEP3Q9H4B8 488 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 CIZ1Q9ULV3 898 aaPredicted RBP13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 NME7Q9Y5B8 376 aa13.7□□□□□ -0.22
CTNNB1-212ENST00000471014 TRIM66O15016 1216 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 SPTLC2O15270 562 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 AKAP3O75969 853 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 CST3P01034 146 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 CASP1P29466 404 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 GNL1P36915 607 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 NASPP49321 788 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 PDE6CP51160 858 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 TNNC1P63316 161 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 ZXDBP98169 803 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 MAPRE1Q15691 268 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 E2F4Q16254 413 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 FAM26FQ5R3K3 315 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 RNF43Q68DV7 783 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 ANO7Q6IWH7 933 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 FILIP1Q7Z7B0 1213 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 LINC00301Q8NCQ3 95 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 MYCBPAPQ8TBZ2 947 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 DDX1Q92499 740 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 SPATA17Q96L03 361 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 ZNF518BQ9C0D4 1074 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 DUSP15Q9H1R2 295 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 ZSCAN16Q9H4T2 348 aaPredicted RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 AGPAT3Q9NRZ7 376 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 CPQQ9Y646 472 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 CACNA1BQ00975 2339 aa13.69□□□□□ -0.22
CTNNB1-212ENST00000471014 ZNF840PA6NDX5 716 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 CLDN5O00501 218 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 TGFB1I1O43294 461 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 CYP17A1P05093 508 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 MBL2P11226 248 aaPredicted RBP13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 OPRD1P41143 372 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 CACNA2D1P54289 1103 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 AMPD3Q01432 767 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 TAF10Q12962 218 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 TRPC3Q13507 836 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 ST3GAL2Q16842 350 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 WDR72Q3MJ13 1102 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 N4BP2L1Q5TBK1 243 aaPredicted RBP13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 LIMS2Q7Z4I7 341 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 SFTPA1Q8IWL2 248 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 USP33Q8TEY7 942 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 ELMO3Q96BJ8 720 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 ZC3H10Q96K80 434 aaKnown RBP13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 CGRRF1Q99675 332 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 EDEM2Q9BV94 578 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 RNF38Q9H0F5 515 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 KIAA1586Q9HCI6 787 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 VPS45Q9NRW7 570 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 PCDHGA5Q9Y5G8 931 aa13.68□□□□□ -0.22
CTNNB1-212ENST00000471014 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 ACACBO00763 2458 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 GREB1Q4ZG55 1949 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 A8MXQ7 604 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 EIF3DO15371 548 aaKnown RBP eCLIP13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 PHACTR2O75167 634 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 RHOBTB1O94844 696 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 CAVIN2O95810 425 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 PTPN1P18031 435 aaKnown RBP13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 SLC6A11P48066 632 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 LIMK1P53667 647 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 MYL6P60660 151 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 KDSRQ06136 332 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 CYP24A1Q07973 514 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 PLA2G2CQ5R387 149 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 TDRD10Q5VZ19 366 aaKnown RBP13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 SCARA5Q6ZMJ2 495 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 IQUBQ8NA54 791 aa13.67□□□□□ -0.22
CTNNB1-212ENST00000471014 XXYLT1Q8NBI6 393 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms