RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 TMCO5BA8MYB1 307 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 F8VP50 259 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 RTN2O75298 545 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 SOAT2O75908 522 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 C1RP00736 705 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 FTLP02792 175 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-209ENST00000470247 ADH1AP07327 375 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 MMP8P22894 467 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 KLRC2P26717 231 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 DEKP35659 375 aaKnown RBP11.89□□□□□ -0.51
SREBF1-209ENST00000470247 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
SREBF1-209ENST00000470247 GABRB2P47870 512 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 RGS7P49802 495 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 CLCN4P51793 760 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 PDCLQ13371 301 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 KCNC3Q14003 757 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 C2CD6Q53TS8 623 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 RAB41Q5JT25 222 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 SDHAF4Q5VUM1 108 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 GPRIN1Q7Z2K8 1008 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 VPS36Q86VN1 386 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 TCEAL8Q8IYN2 117 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 MCOLN2Q8IZK6 566 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 ATRIPQ8WXE1 791 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 KCTD13Q8WZ19 329 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 HSFY1Q96LI6 401 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 DESI2Q9BSY9 194 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 EMILIN2Q9BXX0 1053 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 PACSIN1Q9BY11 444 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 PDCL3Q9H2J4 239 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 DEF6Q9H4E7 631 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 SEPT11Q9NVA2 429 aaKnown RBP11.89□□□□□ -0.51
SREBF1-209ENST00000470247 IL37Q9NZH6 218 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 FBXW11Q9UKB1 542 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
SREBF1-209ENST00000470247 TCRBV5S1A1TA0A578 114 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 PER2O15055 1255 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ERBB2P04626 1255 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 SPATA31D3P0C874 917 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ATF6P18850 670 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 GRIK1P39086 918 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 GALCP54803 685 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ADGRE1Q14246 886 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 DUSP6Q16828 381 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 DDR2Q16832 855 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 HS1BP3Q53T59 392 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 SPATA31D4Q6ZUB0 917 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ERICH1Q86X53 443 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 KHSRPQ92945 711 aaKnown RBP eCLIP11.88□□□□□ -0.51
SREBF1-209ENST00000470247 PPP1R13BQ96KQ4 1090 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 PRDM12Q9H4Q4 367 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 DMAP1Q9NPF5 467 aaPredicted RBP11.88□□□□□ -0.51
SREBF1-209ENST00000470247 CYLDQ9NQC7 956 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.88□□□□□ -0.51
SREBF1-209ENST00000470247 TFR2Q9UP52 801 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 PCDHA13Q9Y5I0 950 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 USP3Q9Y6I4 520 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ATG2AQ2TAZ0 1938 aa11.88□□□□□ -0.51
SREBF1-209ENST00000470247 ATP8B3O60423 1300 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 E5RJQ4 531 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 TRIM66O15016 1216 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 PAPSS1O43252 624 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 GLUD1P00367 558 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 ABL1P00519 1130 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 EPCAMP16422 314 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 POU3F3P20264 500 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 CA8P35219 290 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 MAGEA1P43355 309 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 TUFMP49411 452 aaKnown RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 USP46P62068 366 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 RBM10P98175 930 aaKnown RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 C1QBPQ07021 282 aaKnown RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 MGAT5BQ3V5L5 792 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 LLGL2Q6P1M3 1020 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 MMS22LQ6ZRQ5 1243 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 RBM23Q86U06 439 aaKnown RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 XYLT1Q86Y38 959 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 SCN4BQ8IWT1 228 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 KREMEN2Q8NCW0 462 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 STKLD1Q8NE28 680 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 VN1R2Q8NFZ6 395 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 SCAMP5Q8TAC9 235 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 VCPIP1Q96JH7 1222 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 SPATA17Q96L03 361 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 SEPT5Q99719 369 aaPredicted RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 C11orf70Q9BRQ4 267 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 LACRTQ9GZZ8 138 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 TLE6Q9H808 572 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 CYP4F11Q9HBI6 524 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 ADAM22Q9P0K1 906 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 YIPF1Q9Y548 306 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 CEP83Q9Y592 693 aa11.87□□□□□ -0.51
SREBF1-209ENST00000470247 PRRC2BQ5JSZ5 2229 aaKnown RBP11.87□□□□□ -0.51
SREBF1-209ENST00000470247 CDH23Q9H251 3354 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms