RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C16orf70Q9BSU1 422 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 VRTNQ9H8Y1 702 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 RNF19AQ9NV58 838 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 WDR35Q9P2L0 1181 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 TSPAN16Q9UKR8 245 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 EFR3BQ9Y2G0 817 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 ACTL7BQ9Y614 415 aa15.39■□□□□ 0.05
CBWD3-205ENST00000469687 HGSO14964 777 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 TSPAN1O60635 241 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 DNAJC8O75937 253 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 PFKMP08237 780 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 VDRP11473 427 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 KRT15P19012 456 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 ADORA2AP29274 412 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 RGS7P49802 495 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 TNFAIP2Q03169 654 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 XRCC4Q13426 336 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 LAMC2Q13753 1193 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 CYB5D1Q6P9G0 228 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 MTHFD1LQ6UB35 978 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 CEP128Q6ZU80 1094 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 FAM47EQ6ZV65 393 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 FAM183BPQ6ZVS7 135 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 IFNLR1Q8IU57 520 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 RIBC1Q8N443 379 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 TRABDQ9H4I3 376 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 ASB7Q9H672 318 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 DPP3Q9NY33 737 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 PPEF2O14830 753 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 RNF8O76064 485 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 ATICP31939 592 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 EIF3EP60228 445 aaKnown RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 ICE2Q659A1 982 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 OR6B2Q6IFH4 312 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 SPATA21Q7Z572 469 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 ZC3H18Q86VM9 953 aaKnown RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 TDRPQ86YL5 185 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 PPIL6Q8IXY8 311 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 RMDN2Q96LZ7 410 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 CYP3A43Q9HB55 503 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 UBN1Q9NPG3 1134 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 BARX2Q9UMQ3 279 aaPredicted RBP15.38■□□□□ 0.05
CBWD3-205ENST00000469687 NME7Q9Y5B8 376 aa15.38■□□□□ 0.05
CBWD3-205ENST00000469687 APOC4-APOC2K7ER74 178 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 ASMTLO95671 621 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 APOC2P02655 101 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 HMGCRP04035 888 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 RBP3P10745 1247 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 RPA3P35244 121 aaPredicted RBP15.37■□□□□ 0.05
CBWD3-205ENST00000469687 ZNF143P52747 638 aaPredicted RBP15.37■□□□□ 0.05
CBWD3-205ENST00000469687 CDH6P55285 790 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 POU5F1BQ06416 359 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 MGAT5Q09328 741 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 TMEM62Q0P6H9 643 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 INCA1Q0VD86 236 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 MKRN3Q13064 507 aaKnown RBP15.37■□□□□ 0.05
CBWD3-205ENST00000469687 ZNF792Q3KQV3 632 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 PPP1R21Q6ZMI0 780 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 CCDC125Q86Z20 511 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 TTC13Q8NBP0 860 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 PPTC7Q8NI37 304 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 SPATA18Q8TC71 538 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 RXFP2Q8WXD0 754 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 THOC1Q96FV9 657 aaKnown RBP15.37■□□□□ 0.05
CBWD3-205ENST00000469687 CD248Q9HCU0 757 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 GPATCH2LQ9NWQ4 482 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 RABGEF1Q9UJ41 708 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
CBWD3-205ENST00000469687 C2CD4BA6NLJ0 364 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MAGEB2O15479 319 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 SUN1O94901 812 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 GPD1P21695 349 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MNAT1P51948 309 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 BASP1P80723 227 aaKnown RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 ATP11AP98196 1134 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MARCH8Q5T0T0 291 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 FBXO36Q8NEA4 188 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 DENND1AQ8TEH3 1009 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 PYROXD1Q8WU10 500 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 LRRN4Q8WUT4 740 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 KIF12Q96FN5 646 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 ACAP3Q96P50 834 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 LPIN3Q9BQK8 851 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MAK16Q9BXY0 300 aaKnown RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 PRKAG3Q9UGI9 489 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 PNMA3Q9UL41 463 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 H3BRB1 525 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MAP3K6O95382 1288 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 PDGFRAP16234 1089 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 DNAJC3Q13217 504 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 SLC1A5Q15758 541 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 GOLGA7BQ2TAP0 167 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 PPP1R26Q5T8A7 1209 aaPredicted RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 SHCBP1Q8NEM2 672 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 ZMAT2Q96NC0 199 aaKnown RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 KATNBL1Q9H079 304 aa15.36■□□□□ 0.05
CBWD3-205ENST00000469687 TUT1Q9H6E5 874 aaKnown RBP15.36■□□□□ 0.05
CBWD3-205ENST00000469687 SLCO1B3Q9NPD5 702 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms