RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 SOX10P56693 466 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 SRSF4Q08170 494 aaKnown RBP3.88□□□□□ -1.79
TPR-204ENST00000469463 MYO1EQ12965 1108 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 COBLL1Q53SF7 1204 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 PLAC9Q5JTB6 97 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 AMIGO2Q86SJ2 522 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 LIX1LQ8IVB5 337 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 CCDC33Q8N5R6 958 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 BPIFB1Q8TDL5 484 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 SMCR8Q8TEV9 937 aaPredicted RBP3.88□□□□□ -1.79
TPR-204ENST00000469463 SARAFQ96BY9 339 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 R3HDM4Q96D70 268 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 C8orf48Q96LL4 319 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 NELL2Q99435 816 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 PTDSS2Q9BVG9 487 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 DPCDQ9BVM2 203 aaPredicted RBP3.88□□□□□ -1.79
TPR-204ENST00000469463 AMBRA1Q9C0C7 1298 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 CXorf36Q9H7Y0 433 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 SERHLQ9NQF3 203 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 ENTPD2Q9Y5L3 495 aa3.88□□□□□ -1.79
TPR-204ENST00000469463 MBD3L4A6NDZ8 208 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 MBD3L3A6NE82 208 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 CGB1A6NKQ9 187 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ISM1B1AKI9 464 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 VWC2LB2RUY7 222 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 H7C4K7 107 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 MYO1FO00160 1098 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 RAB27BO00194 218 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 QSOX1O00391 747 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 KIF3BO15066 747 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 KPNA5O15131 536 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 PROM1O43490 865 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 FRS3O43559 492 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 TLR5O60602 858 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 NBPF7P0C2Y1 421 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 MYF5P13349 255 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ENGP17813 658 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 GPD1P21695 349 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ALDH9A1P49189 494 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 PDE6CP51160 858 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 TPTEP56180 551 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 WNT3P56703 355 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 SP2Q02086 613 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 TCF15Q12870 199 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 STK3Q13188 491 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 GALEQ14376 348 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 PTPRRQ15256 657 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 TREML2Q5T2D2 321 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ZNF618Q5T7W0 954 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 KIAA0895LQ68EN5 471 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ZDHHC24Q6UX98 284 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 CHST15Q7LFX5 561 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 RASAL3Q86YV0 1011 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 Q8N9P0 234 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 C9orf106Q8NAJ2 232 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 OR56A3Q8NH54 315 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 HASPINQ8TF76 798 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 OSCP1Q8WVF1 389 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 MAML1Q92585 1016 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 GLG1Q92896 1179 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 HAPLN3Q96S86 360 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 A1CFQ9NQ94 594 aaKnown RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 TRMT13Q9NUP7 481 aaKnown RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 DKK3Q9UBP4 350 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 ZNF70Q9UC06 446 aaPredicted RBP3.87□□□□□ -1.79
TPR-204ENST00000469463 MID2Q9UJV3 735 aa3.87□□□□□ -1.79
TPR-204ENST00000469463 TRIM43BA6NCK2 446 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 IKBKBO14920 756 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 SLC16A3O15427 465 aaKnown RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 PRC1O43663 620 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 VNN1O95497 513 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 KRT18P05783 430 aaKnown RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 LIPAP38571 399 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 PTDSS1P48651 473 aaKnown RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 CARSP49589 748 aaKnown RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 CCT8P50990 548 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 ARFIP2P53365 341 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 PROK1P58294 105 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 SEMA5AQ13591 1074 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 BMPR2Q13873 1038 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 INSCQ1MX18 579 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 ZIK1Q3SY52 487 aaPredicted RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 DPY19L3Q6ZPD9 716 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 MAVSQ7Z434 540 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 SESTD1Q86VW0 696 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 YAF2Q8IY57 180 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 DNAJB14Q8TBM8 379 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 IPCEF1Q8WWN9 437 aaPredicted RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 TRIM43Q96BQ3 446 aaPredicted RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 APIPQ96GX9 242 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 NUP62CLQ9H1M0 184 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 SMURF2Q9HAU4 748 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 GBA2Q9HCG7 927 aaPredicted RBP3.86□□□□□ -1.79
TPR-204ENST00000469463 ARHGEF3Q9NR81 526 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 TBC1D23Q9NUY8 699 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 ZNF212Q9UDV6 495 aa3.86□□□□□ -1.79
TPR-204ENST00000469463 LOC102723971A0A1B0GUV8 181 aa3.85□□□□□ -1.79
TPR-204ENST00000469463 A1L4Q6 167 aa3.85□□□□□ -1.79
TPR-204ENST00000469463 PMM2O15305 246 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms