RNA–Protein interactions for RNA: ENST00000467742.1

TRIM27-204, Transcript of tripartite motif containing 27, humanhuman

TSL 2

Gene TRIM27, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-204ENST00000467742 NOP2P46087 812 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 KCNJ6P48051 423 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 SARSP49591 514 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 DNM2P50570 870 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NDUFA8P51970 172 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NCKAP1LP55160 1127 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 PCBP3P57721 371 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NUCB2P80303 420 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 HTRA4P83105 476 aaPredicted RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 POU4F1Q01851 419 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 TAP1Q03518 808 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 IFRD2Q12894 506 aaPredicted RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 CUL4BQ13620 913 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 PAN2Q504Q3 1202 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NT5DC1Q5TFE4 455 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 ATL3Q6DD88 541 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 MRM1Q6IN84 353 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 SLC39A4Q6P5W5 647 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 RNF111Q6ZNA4 994 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 DPH6Q7L8W6 267 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 CATSPER4Q7RTX7 472 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 ARHGEF39Q8N4T4 335 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 FIBCD1Q8N539 461 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 FSIP1Q8NA03 581 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 TMEM161BQ8NDZ6 487 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 BVESQ8NE79 360 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 RASSF8Q8NHQ8 419 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 TCP11Q8WWU5 503 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 MRPS27Q92552 414 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 KIFAP3Q92845 792 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 APBB2Q92870 758 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 TOP1MTQ969P6 601 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 TCTN2Q96GX1 697 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 GUCD1Q96NT3 240 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 DEPDC7Q96QD5 511 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 SRPK1Q96SB4 655 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 JPH2Q9BR39 696 aaPredicted RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NFKBIZQ9BYH8 718 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 GCOM2Q9BZD3 368 aaPredicted RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 BLZF1Q9H2G9 400 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 NXF3Q9H4D5 531 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 CARS2Q9HA77 564 aaKnown RBP5.4□□□□□ -1.54
TRIM27-204ENST00000467742 RGS18Q9NS28 235 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 CHMP5Q9NZZ3 219 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 CTNND2Q9UQB3 1225 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 HES2Q9Y543 173 aa5.4□□□□□ -1.54
TRIM27-204ENST00000467742 MTCL1Q9Y4B5 1905 aaKnown RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 DENND3A2RUS2 1198 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 LINC01553A4QN01 128 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 INO80B-WBP1J3KQ70 363 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 K7ENM7 598 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 RFXAPO00287 272 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 KLRC4O43908 158 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 FAM189A1O60320 539 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 DGKIO75912 1065 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 NPTXRO95502 500 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 MYBP10242 640 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 PLS3P13797 630 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 SFPQP23246 707 aaKnown RBP eCLIP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 CMA1P23946 247 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 PBX3P40426 434 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 SMAD3P84022 425 aaKnown RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 RBM10P98175 930 aaKnown RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 COASYQ13057 564 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 TFDP1Q14186 410 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 MXD4Q14582 209 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 FAM187BQ17R55 369 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 SV2CQ496J9 727 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZC2HC1CQ53FD0 456 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZBTB41Q5SVQ8 909 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 RRAGBQ5VZM2 374 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 TWF2Q6IBS0 349 aaKnown RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 CCDC73Q6ZRK6 1079 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 LRRC55Q6ZSA7 311 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 SRGAP1Q7Z6B7 1085 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZSWIM9Q86XI8 627 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ECHDC2Q86YB7 292 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 CREG2Q8IUH2 290 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZNF513Q8N8E2 541 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZSWIM2Q8NEG5 633 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ENGASEQ8NFI3 743 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ERCC4Q92889 916 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZNF689Q96CS4 500 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 MRFAP1L1Q96HT8 127 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 ZBTB45Q96K62 511 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 FAM84AQ96KN4 292 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 IPO9Q96P70 1041 aaKnown RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 CASD1Q96PB1 797 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 C17orf80Q9BSJ5 609 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 STRA6Q9BX79 667 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 TRIM9Q9C026 710 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 INO80BQ9C086 356 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 SCAND2PQ9GZW5 306 aaPredicted RBP5.39□□□□□ -1.55
TRIM27-204ENST00000467742 CDT1Q9H211 546 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 TNMDQ9H2S6 317 aa5.39□□□□□ -1.55
TRIM27-204ENST00000467742 FZD8Q9H461 694 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms